Pseudomonas sediminis: HNQ25_09170
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Entry
HNQ25_09170 CDS
T07154
Symbol
mexC
Name
(GenBank) MexC family multidrug efflux RND transporter periplasmic adaptor subunit
KO
K18295
membrane fusion protein, multidrug efflux system
Organism
psej
Pseudomonas sediminis
Module
psej_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psej02000
]
HNQ25_09170 (mexC)
01504 Antimicrobial resistance genes [BR:
psej01504
]
HNQ25_09170 (mexC)
Transporters [BR:
psej02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HNQ25_09170 (mexC)
Antimicrobial resistance genes [BR:
psej01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
HNQ25_09170 (mexC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF4398
NdhS
BMFP
OEP
Motif
Other DBs
NCBI-ProteinID:
QNH02871
LinkDB
All DBs
Position
complement(1931202..1932371)
Genome browser
AA seq
389 aa
AA seq
DB search
MSRIRGRYVFSVVTLLAAIGLAGCDKGEQGWGEAPPREVDVLTVKPEPFTVIAELPGRIE
PVRTAEVRARVAGIVLKRTFEEGSDVKAGDLLFQIDPAPFKAALSRAQGELARAEAQLFQ
AQATVKRYEPLVKIDAVSKQDFDVAKAALQSAQADKRSAQASVETARLDLGYAEVRAPIA
GRIGRAQVTEGALVGQGEATLLARIQQLDPVYADFTQPAADALRLRAAIADGKVSGAADK
QLSLRVDGTDIESNGTLLFTDISVDRSTGQIALRGRFDNPQGVLLPGMYVRVRTPQGLDQ
NAILVPQRAVQRSADGQASVMLLGADDTVESRPVTTGAMQGSRWQISEGLKPGDKVIVSS
LSAIRPGAKVVPREEGAPASDAASQPKAQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaattcgcggacgttacgttttttcagtggtcactctgttggcagcaatcggc
ctggccggctgcgacaaaggcgagcaaggctggggcgaggcaccgccacgcgaagtcgac
gtactgaccgtcaagcccgagccgttcaccgtgatcgccgaactgccaggccgtatcgaa
ccggtgcgtaccgctgaagtacgcgcccgggtcgccggcatcgtgctcaagcgcaccttc
gaggaagggagcgacgtcaaggccggcgacctgctgttccagatcgacccggcgccgttc
aaggccgccctatctcgtgcccagggcgaactggcgcgcgccgaggcgcagctgttccag
gctcaggccacggtcaagcgctacgagccgctggtgaagatcgatgctgtcagcaagcag
gacttcgatgtagccaaggccgccctgcaaagcgcgcaggccgacaagcgctcggcacaa
gccagcgtggaaacggcacgccttgatctgggttacgccgaagtacgcgcgccgattgcc
gggcgcattggccgtgcccaggtgaccgaaggcgcactggtcggccagggtgaagccacc
ctgctcgcgcgcattcagcagctcgacccggtgtatgccgacttcacccagccagccgcc
gatgccctgcgcctgcgtgccgctatcgccgatggcaaggtctccggtgcggccgacaag
cagctgtcgctgcgcgtcgacggcaccgacatcgagagcaacggcaccctgctgttcacc
gatatctcggtggatcgcagcaccggccagatcgctctgcgcgggcgtttcgacaacccg
caaggtgtgctgctgccgggcatgtacgtacgtgtgcgcaccccgcaaggcctcgaccag
aacgccattctggtgccacaacgcgccgttcagcgctctgccgatggccaggccagcgtg
atgttgctgggcgctgacgacaccgtcgagtcacgcccggtcaccactggcgccatgcag
ggttcgcgctggcagatcagtgaaggcctcaagccgggtgacaaggtcatcgtcagctcg
ctgtcggcgatccgccccggtgccaaggtggtgccccgcgaagaaggcgcgccagcgtcc
gacgccgccagccaacccaaggcgcaataa
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