Pseudomonas sediminis: HNQ25_09550
Help
Entry
HNQ25_09550 CDS
T07154
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psej03016
]
HNQ25_09550 (truD)
Enzymes [BR:
psej01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HNQ25_09550 (truD)
Transfer RNA biogenesis [BR:
psej03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HNQ25_09550 (truD)
Prokaryotic type
HNQ25_09550 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QNH02947
LinkDB
All DBs
Position
2014385..2015443
Genome browser
AA seq
352 aa
AA seq
DB search
MNELQLLGPRAHGEACGRAVLKATAEDFQVDEVLDIPLTGQGEHLWLWVEKRGLNTEEAA
RRIARAAGLPLKAVSYAGLKDRQALTRQWFSLHLPGKADPDLAAAQGDDLVILRSQRHNR
KLQRGAHAANGFTLRLTALEADRDALEQRLQRIAEQGVPNYFGLQRFGFDGGNVEQARDF
ASRQELPVQRNLRSRLLSSARSYLFNQVLAKRVAAGTWNQAQVGDLLAFTASRSFFMAGE
AECVDPRLAILDLHPTGPLWGDGPLPTAGETQQLEQAVADEAGQLVQWLIKADMAHERRI
LRLPIGGLSWHYPEPDILQLAFVLPAGCFATVVVRELLDLVPAGQTDTPCEF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgcaactgctggggccgcgcgcccatggcgaggcctgtggtcgtgcggta
ctcaaggccactgccgaggattttcaggtcgatgaagtactggatatcccactcactggc
cagggtgagcatctgtggttgtgggtggaaaagcgtggcctgaataccgaggaggccgcc
cggcggatcgcccgcgctgccggcctgccgctcaaggcggtcagttacgcgggactcaag
gatcgtcaggcgctgacccggcagtggttcagtctgcacctgccgggcaaggccgacccc
gatctggccgctgcccagggcgatgatctggtcatcctgcgcagccagcgacacaaccgc
aaattgcagcgtggtgcccatgccgccaatggcttcaccttgcgcctgactgcccttgag
gcggaccgcgacgcgctggagcagcgtctgcagcgtatcgccgagcaaggcgtgcccaac
tatttcggcttgcagcgctttggcttcgatggcggcaatgtcgagcaggcgcgtgatttc
gcctcgcgccaggagttgccggtgcagcgcaacctgcgctcgcgcctgctctcatcggcg
cgcagttacctgttcaaccaggtgctggccaagcgcgtggctgccggcacctggaaccag
gcgcaggtcggcgacctgctggccttcactgccagtcgtagtttcttcatggctggcgag
gccgagtgtgttgacccgcgcctggctattctcgatctgcatcccaccggcccgctttgg
ggggacggtccgttgccgaccgctggtgagacccagcagctggagcaggcggtggccgat
gaggccgggcaactggtgcaatggctgatcaaggcggacatggcgcacgaacggcgaatt
ctgcgcctccccatcggcggcctgtcatggcattatcccgaacccgatattctgcaactt
gcattcgtcctgccggccgggtgtttcgccaccgtggtggtgcgcgaattgctcgatctg
gtgccagcagggcagacggatactccatgcgaattctga
DBGET
integrated database retrieval system
