Pseudomonas sediminis: HNQ25_09575
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Entry
HNQ25_09575 CDS
T07154
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psej03021
]
HNQ25_09575 (rpoS)
Transcription machinery [BR:
psej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HNQ25_09575 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
KinB_sensor
Motif
Other DBs
NCBI-ProteinID:
QNH02951
LinkDB
All DBs
Position
2018847..2019854
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AA seq
335 aa
AA seq
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MALIKKEAPEFDVDDELLLMEPGIVFGEVQGDEVEAPVARTKAKNATPSKQHKYIDYTRA
LDATQLYLNEIGFSPLLTPEEEVHFARLAQKGDPAGRKRMIESNLRLVVKIARRYVNRGL
SLLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKE
LNVYLRAARELTQKLDHEPSAEEIANLLEKPVGEVKRMLGLNERVSSVDVSLGPDSDKTL
LDTLTDDRPTDPCELLQDDDLSQSIDQWLSDLTDKQREVVVRRFGLRGHESCTLEEVGQE
IGLTRERVRQIQVEALKRLREILEKNGLSSDALFQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggctctcatcaaaaaagaagcgccggagtttgacgtcgacgatgaactgctcctcatg
gagcctggcatcgttttcggcgaggttcagggcgatgaggtggaagcgccggtcgcacgt
accaaggccaagaacgccaccccatccaagcagcacaagtacatcgactacacccgggcg
ctagacgccactcagctttacctcaacgaaatcggtttctctcccttgctcactcccgaa
gaggaagtgcacttcgcgcgtctggcgcagaagggcgatcctgccgggcgcaagcgcatg
atcgagagcaacctgcggctggtcgtgaagatcgccaggcgttacgtcaatcgcggtctt
tccctgctcgatctgatcgaggagggcaatctcggcttgattcgcgccgtggaaaagttc
gatccggagcgggggttccgtttctcgacctatgcaacctggtggattcgccagaccatc
gaacgcgccatcatgaaccagacgcgaaccatccgtttgccgattcatgtggtgaaggag
ctcaacgtctacctacgagcggcccgtgagctgacccagaaactcgaccatgagccttct
gcggaagaaattgccaacctgctggaaaaaccggtgggcgaggtcaagcgcatgctcggc
ctcaacgaacgcgtatcctcggtggacgtttcgctcggtccggactcggacaagacactg
ctcgacaccctgaccgatgatcgcccgaccgatccctgtgagctgttgcaggacgatgat
ctgtcgcagagcatcgatcagtggctttccgacctgaccgacaaacaacgggaagtcgtt
gtgcgccgcttcggtctgcgcggccatgaaagctgtacccttgaagaggtagggcaggag
atcggcctgacccgcgagcgagtgcggcagattcaggtcgaggcgctcaagcgcctgcgg
gagattctcgagaagaacggcttgtccagcgacgccttgtttcagtga
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