Pseudomonas sediminis: HNQ25_10625
Help
Entry
HNQ25_10625 CDS
T07154
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
psej
Pseudomonas sediminis
Pathway
psej02020
Two-component system
psej02025
Biofilm formation - Pseudomonas aeruginosa
psej02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HNQ25_10625
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HNQ25_10625
09142 Cell motility
02040 Flagellar assembly
HNQ25_10625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psej03021
]
HNQ25_10625
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psej02035
]
HNQ25_10625
Transcription machinery [BR:
psej03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HNQ25_10625
Bacterial motility proteins [BR:
psej02035
]
Flagellar system
Flagellar assembly proteins
Stator
HNQ25_10625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
MarR_2
HTH_30
GerE
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QNH03149
UniProt:
A0ABX6SMY1
LinkDB
All DBs
Position
2280615..2281361
Genome browser
AA seq
248 aa
AA seq
DB search
MTAASGLRMYNKAQAQDSQHQLIERYAPLVKRIAYHLLARLPASVQVDDLIQAGMIGLLE
ASRKYDSSKGASFETFAGIRIRGSMLDEVRKGDWAPRSVHRNSRMVSDAIRVVEARTGRD
AKDHEVAAELQLSLEDYYGILGDTLGSRLFSFDDLLQDGEHGGLHEDAGHNHLEPSRDLE
DERFQAALADAIAGLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRS
RLSEWRAG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgacagcagcctctggacttcgtatgtacaacaaggctcaggcgcaggactcccagcac
caactgatcgagcgctatgcgccgctggtcaaacgcatcgcctaccacctgttggcccgt
ctaccggccagcgtgcaggtcgatgatctgatccaggccggcatgatcggtttgctcgaa
gcctcgcgcaaatacgactccagcaagggcgccagtttcgagactttcgccggtatccgc
attcgcggctccatgctcgatgaggtgcgcaagggcgattgggcgccgcgttcggtgcac
cgcaacagccgcatggtcagcgacgccattcgtgtggttgaggcaagaaccgggcgtgac
gctaaagatcacgaggttgcggccgaactccaattgagtctggaggattactacggcatt
cttggcgacactttgggcagccgcctgttcagtttcgacgacctgttgcaggacggcgag
cacggcgggttgcacgaagacgccgggcacaaccacctcgaaccttcgcgggacctcgaa
gacgaacgcttccaggcggctttggccgatgccatcgccggtttgccggagcgtgaacgt
ctggtgctggcgctgtattacgatgaagaactgaacttgaaggaaatcggtgaagtgctg
ggggttagcgagtcacgcgtgagccagttgcacagccagtgcgcggcgcgtttgcgctcg
cggctgagtgaatggcgcgctggctga
DBGET
integrated database retrieval system
