Pseudomonas sediminis: HNQ25_10755
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Entry
HNQ25_10755 CDS
T07154
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psej03032
]
HNQ25_10755
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_10755
Enzymes [BR:
psej01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HNQ25_10755
DNA replication proteins [BR:
psej03032
]
Prokaryotic type
DNA Topoisomerases
HNQ25_10755
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HNQ25_10755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Acetyltransf_5
Motif
Other DBs
NCBI-ProteinID:
QNH03175
LinkDB
All DBs
Position
complement(2302851..2303876)
Genome browser
AA seq
341 aa
AA seq
DB search
MSTAPDDIDLPADLRYVDDSMPGISRRKLRGKFCYFDSQGQRIRDKRQVARIDALAVPPA
YTDVWICPFANGHLQATGRDARGRKQYRYHARWREIRDADKYASLLAFGKALPALREALQ
QHLSLREHRREKVLATVIMLLDNTLIRVGNARYARENRSYGLTTLRNRHVEVQGSTIRFH
FRGKSGIEHEVQVSDRRLARIIQRCLELPGQHLFQYLDEDGERRAVTSTDINDYLRELTG
ADFTAKHYRTWAGSALALTLLRELEWQPESAAKKHVVAMVKEVAEQLRNTPAVCRKCYIH
PALIEAFQAGDLAGIRLATPRKGLRIEESLLMRFLEKLPPA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcgcctgacgacatcgatctacccgccgacctgcgctatgtcgacgacagc
atgccgggcatcagccggcgcaagctgcgtggcaagttctgctatttcgacagccagggc
cagcgcatccgcgacaagcgacaagtggcccggatcgatgccctggcagtgccgcccgcc
tataccgacgtgtggatctgcccattcgccaacggccatttgcaagcaaccggccgcgat
gcccgcggacgcaagcaataccgctatcacgcacgctggcgcgaaatccgcgatgccgac
aaatacgccagcctgctggcattcggcaaggcactgccagcactgcgggaagcgttgcag
cagcacctgagcctacgcgagcaccgccgcgagaaagtgttggccaccgtgatcatgctg
ctggacaacaccctgatccgggtcggcaacgcccgctacgcgcgggaaaatcgctcctat
ggcctgaccaccctgcgcaaccgtcacgtcgaggtacaaggcagcacgattcgctttcac
ttccgtggcaagagcggtatcgaacacgaggtacaggtcagtgatcgccgcctggcccgc
atcatccagcgttgtctggaactgcccgggcaacacctgttccagtatctggacgaggat
ggcgaacgtcgcgcggtgacctccaccgacatcaacgactacctgcgtgaactgaccggc
gccgacttcaccgccaagcactaccgtacctgggccggcagcgcgctggccctgacgctg
ctgcgcgagctcgagtggcagccggaaagcgcggccaagaaacatgtggtggccatggtc
aaggaagtggctgagcaattgcgcaatacgccagctgtctgccgcaagtgctacatccat
cctgctctgatcgaagccttccaggctggcgatctggctggcatccgcctggcaacaccg
cgcaagggcctgcgcatcgaagaaagcctgctgatgcgttttctggaaaaactgccaccc
gcctga
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