Pseudomonas sediminis: HNQ25_12040
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Entry
HNQ25_12040 CDS
T07154
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psej
Pseudomonas sediminis
Pathway
psej03030
DNA replication
psej03430
Mismatch repair
psej03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HNQ25_12040 (dnaQ)
03430 Mismatch repair
HNQ25_12040 (dnaQ)
03440 Homologous recombination
HNQ25_12040 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psej03032
]
HNQ25_12040 (dnaQ)
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_12040 (dnaQ)
Enzymes [BR:
psej01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HNQ25_12040 (dnaQ)
DNA replication proteins [BR:
psej03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HNQ25_12040 (dnaQ)
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HNQ25_12040 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QNG99058
UniProt:
A0ABX6SE11
LinkDB
All DBs
Position
2583776..2584534
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AA seq
252 aa
AA seq
DB search
MTIENTVRRYVVLDTETTGMPVTDGHRIIEIGCVELLGRRLTGRHFHVYLNPDREIDEGA
IAVHGITNEYVADKPRFKEVADEFYEFIKGAQLIIHNAAFDVGFINNEFALLGQSERADV
SDYCSVLDTLMMARERHPGQRNSLDALCKRYGVDNSNRELHGALLDSEILADVYLAMTGG
QTNLSLAGEGSDGDGSGRQQATPIRRLDASRPRTRVIRASEDELAAHMARLAVIEKSAGG
PSLWAQLEKAPE
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
gtgacaatcgagaacaccgtcagacgctacgtagtactggataccgaaaccacgggtatg
ccggttaccgacgggcaccgcatcatcgagatcggttgtgtcgaattgctgggccgccgc
ctcaccgggcgtcacttccacgtttacctcaaccccgatcgtgaaatcgacgaaggcgcc
atcgcggttcacggcatcaccaacgagtacgtcgccgacaagccgcgtttcaaggaggtc
gccgatgaattctacgagttcatcaaaggcgcccagctgatcatccacaacgcggcgttc
gacgttggtttcatcaacaacgagttcgccctgttggggcaaagcgagcgtgccgacgtc
agcgattactgctcggtgctcgataccctgatgatggcgcgcgagcgtcatccggggcag
cgtaatagcctcgatgctctgtgcaagcgttacggcgtcgacaactccaaccgcgaactg
cacggcgccttgctcgactcggagattcttgccgacgtctacctggcgatgactggtggg
cagaccaatctgtcactggccggtgaaggttccgatggtgatggcagtgggcgtcagcag
gccacgccgatccgtcgtcttgatgcatcgcgtccgcgtactcgcgtcattcgcgccagc
gaagacgaactagcggcgcacatggcgcgtctggccgtgatcgaaaaatccgcgggcggt
ccgtcgttgtgggcgcagttggaaaaagcgccggaataa
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