Pseudomonas sediminis: HNQ25_12320
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Entry
HNQ25_12320 CDS
T07154
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psej01002
]
HNQ25_12320
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psej01011
]
HNQ25_12320
Peptidases and inhibitors [BR:
psej01002
]
Cysteine peptidases
Family C82
HNQ25_12320
Peptidoglycan biosynthesis and degradation proteins [BR:
psej01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HNQ25_12320
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
Motif
Other DBs
NCBI-ProteinID:
QNG99114
UniProt:
A0ABX6SEG9
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All DBs
Position
2640459..2641415
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AA seq
318 aa
AA seq
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MLSRFSAVNRCLTLVALCSSAAVQALELPLPPPGEDVVGQVQVIKAKYEDTFADLGTAND
LGYLEMVAANPGIDPWLPGEGSEIILPTRYVLPPGPREGIVINLAEYRLYYFPKGQNVVH
TFPLGIGREGWGSPLGVGRVTVKTPNPAWYPPQSIRDEHAADGDILPTVVPPGPDNPLGP
YKMTLSFPGYLIHGSNKKFGIGMRVSHGCFRMLNHNVLELAGMVPVGTPVRILNEPYKFG
VSGGKVYLEAHAPLDDEGDPSVVDKHTAVINALLKRDELSGLRLDWEMVREVVAAEDGMP
VPIAAQTESVVASSDNPF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgcgcttttctgcggtcaaccgctgcctgactctggtcgcactgtgctccagt
gccgcagtgcaggctctcgaacttccactgccgccgccaggcgaggatgtggtgggccag
gtacaggtgatcaaggccaagtacgaggacacctttgccgatctgggaacggcaaacgac
ctcggctatctggaaatggttgcagccaacccaggcatcgacccctggctgccgggcgag
ggcagcgagatcatcctgccgacgcgttacgtgctgccgccgggcccacgtgaaggtatc
gtgatcaacctggccgagtaccgtctctactacttcccgaaagggcagaacgtcgtgcat
accttcccactgggcatcggtcgtgaaggctggggatcaccactgggtgttggccgggta
acggtgaagacgccgaacccggcctggtatccgccccaatcgatccgtgatgagcacgct
gctgacggcgatattctgcccactgttgtgccgccaggcccggacaatccactgggccca
tacaagatgacactgtcgttcccgggttacctgatccatggttcgaacaagaagttcggt
atcggcatgcgcgtcagccatggctgcttccgcatgctcaatcacaacgtgctggagttg
gcgggcatggtgcctgtcggcactcccgtgcgcattctgaacgagccgtacaagttcggc
gttagcggtggcaaggtctatctggaagcgcatgcgccgctggatgatgagggtgatcca
tccgtcgtcgacaagcacacggcggtgatcaatgcactgctcaagcgtgacgaactcagc
ggcctgcgtcttgactgggagatggttcgtgaagtggttgctgccgaggacggcatgccg
gtgcccatcgcggcacagaccgagagcgtggtggcgagcagcgacaacccgttctga
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