Pseudomonas sediminis: HNQ25_14995
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Entry
HNQ25_14995 CDS
T07154
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psej03032
]
HNQ25_14995 (ihfB)
03036 Chromosome and associated proteins [BR:
psej03036
]
HNQ25_14995 (ihfB)
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_14995 (ihfB)
DNA replication proteins [BR:
psej03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HNQ25_14995 (ihfB)
Chromosome and associated proteins [BR:
psej03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
HNQ25_14995 (ihfB)
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
HNQ25_14995 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
CATASP
Motif
Other DBs
NCBI-ProteinID:
QNG99606
UniProt:
A0ABX6SDT1
LinkDB
All DBs
Position
complement(3201683..3201970)
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AA seq
95 aa
AA seq
DB search
MTKSELIERIVTHQGQLSSKDVELAIKTMLEQMSQALATGDRIEIRGFGSFSLHYRAPRV
GRNPKTGQSVRLDGKFVPHFKPGKELRDRVNEDDE
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtcggagttgatcgaaagaattgtcactcatcaaggtcagctgtcctccaag
gatgtcgagctagccattaagaccatgctcgagcaaatgtcccaagcactggccacgggg
gatcgcatcgagattcgcggctttggcagcttctcgctgcactaccgcgcaccgcgcgtt
gggcgcaacccaaaaaccggccagtcggtacgcttggacggcaagttcgtgccgcatttc
aagccgggcaaggagttgcgcgaccgggtcaatgaggacgacgagtga
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