Pseudomonas sediminis: HNQ25_16535
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Entry
HNQ25_16535 CDS
T07154
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psej
Pseudomonas sediminis
Pathway
psej00071
Fatty acid degradation
psej00280
Valine, leucine and isoleucine degradation
psej00310
Lysine degradation
psej00362
Benzoate degradation
psej00380
Tryptophan metabolism
psej00410
beta-Alanine metabolism
psej00640
Propanoate metabolism
psej00650
Butanoate metabolism
psej00907
Pinene, camphor and geraniol degradation
psej00930
Caprolactam degradation
psej01100
Metabolic pathways
psej01110
Biosynthesis of secondary metabolites
psej01120
Microbial metabolism in diverse environments
psej01200
Carbon metabolism
psej01212
Fatty acid metabolism
Module
psej_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
HNQ25_16535 (fadB)
00650 Butanoate metabolism
HNQ25_16535 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
HNQ25_16535 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
HNQ25_16535 (fadB)
00310 Lysine degradation
HNQ25_16535 (fadB)
00380 Tryptophan metabolism
HNQ25_16535 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
HNQ25_16535 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
HNQ25_16535 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HNQ25_16535 (fadB)
00930 Caprolactam degradation
HNQ25_16535 (fadB)
Enzymes [BR:
psej01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
HNQ25_16535 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
HNQ25_16535 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
HNQ25_16535 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
HNQ25_16535 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QNG99892
UniProt:
A0A7G7RAU1
LinkDB
All DBs
Position
complement(3518427..3520574)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRASVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLAVPTVVAINGIALGGGFE
MCLAGDYRVMSDSAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAVEWIASGKENRAEDAL
KVGAVDAVVSADKLQAAALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMCFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KKKAKHHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEASKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEGVVR
EDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVSDPAAYELLKSIVVEEREVTDEDIINFMMIPLCMETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYAELGALYHPTAKLREMAAKGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagtggcatcgtcgaattg
aagttcgacctcaagggtgagtccgtcaacaaattcaaccgtcttaccctcaatgagctg
cgcgcctccgtcgacgcgatcaaggctgacggttcgatcaagggcgtgattgtcaccagt
ggcaaagacgtgttcatcgtcggtgccgatatcaccgaattcgtcgacaacttcaaactg
cccgacgaagaactggtggctggcaacctggaagccaacaagatcttcagtgatttcgaa
gacctcgccgtgccgaccgtcgtcgccatcaacggcatcgccctgggtggcggtttcgag
atgtgcctggccggtgactaccgtgtcatgagcgatagcgccaagatcggcctgccagaa
gtcaaactgggcatctacccaggcttcggcggcaccgtgcgtctgccgcgcgtgatcggt
accgacaacgccgtcgagtggattgcatcgggcaaggaaaaccgcgccgaagacgccctg
aaagtgggcgccgtcgatgctgtggtcagtgcagacaagctgcaggccgccgcgctggat
ctggtcaagcgcgccatctccggcgagctggactacaaggccaagcgtcagcccaagctg
gaaaagctcaagctcaacgccatcgagcagatgatgtgcttcgagaccgccaagggcttc
gttgctggccaggccggcccgaactacccggctccggtcgaggcgatcaagaccattcag
aaagccgccaacttcggccgtgacaaggcgctggaagttgaagctgccggcttcgtcaaa
ctggccaagacctcggttgccgagagcctgatcggcctgttcctgaacgatcaggagctg
aaaaagaaagccaagcaccacgacgaaatcgcccgcgacgtgaaactggctgccgtactc
ggcgccggcatcatgggtggtggtatcgcctaccagtcggcttccaaaggtacgccgatc
ctgatgaaggatatccgtgaagagggtatccagatgggcttgaacgaggcttccaagctg
ctcggcaagcgcgtcgagaagggccgtatgacccctgcgaagatggctgaagccctcaac
gccatccgcccgaccatgtcctacggtgatttcggcaacgtcgacatcgtcgtcgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggcagaagtggaaggcgtggtgcgt
gaagacgccatcctggcctccaacacctcgaccatctccatcagcctgttggcccaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgtggcgagaagtccagcgaagtggccgttgccaccaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgtgtactgttcccgtacttcggcggcttctccaagctgctgggcttcggcgtcgac
ttcgtgcgtatcgacaaggtgatggagaagttcggctggcccatgggcccggcttacctc
tctgacgtggtcggcatcgacactggccaccacggccgtgacgtgatggccgaaggcttc
ccggatcgtatggccgtggaaggcaagaccgccgtcgatgtgatgtacgaagccaaccgc
ctgggccagaagaatggcaagggcttctacgcctacgagaccgacaagcgcggcaaaccg
aagaaggtctccgacccggctgcctacgagctgctcaagtccatcgtggtcgaagagcgt
gaagtcaccgacgaggacatcatcaatttcatgatgatcccgctgtgcatggaaaccgtt
cgttgcctggaagacggcatcgtcgacactgcagccgaggccgacatgggcctgatctac
ggtatcggcttccctcccttccgtggcggtgcgctgcgctacatcgattccatcggtgtt
gctgaattcgtcgccctggctgacaagtatgccgagctgggcgccctgtaccacccgacc
gcaaaacttcgcgaaatggccgccaagggccagaagttcttcggttaa
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