Pseudomonas sediminis: HNQ25_17805
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Entry
HNQ25_17805 CDS
T07154
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
psej
Pseudomonas sediminis
Pathway
psej00260
Glycine, serine and threonine metabolism
psej00630
Glyoxylate and dicarboxylate metabolism
psej00670
One carbon pool by folate
psej00785
Lipoic acid metabolism
psej01100
Metabolic pathways
psej01110
Biosynthesis of secondary metabolites
psej01200
Carbon metabolism
Module
psej_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HNQ25_17805 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HNQ25_17805 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
HNQ25_17805 (gcvP)
00670 One carbon pool by folate
HNQ25_17805 (gcvP)
Enzymes [BR:
psej01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
HNQ25_17805 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Sde2_N_Ubi_yeast
Motif
Other DBs
NCBI-ProteinID:
QNH00136
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Position
3788771..3791623
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AA seq
950 aa
AA seq
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MTKLDTQNEFIARHIGPRDADTAAMLELLGYDSVDALTGAVIPESIKGTSILGEQPGLSE
ADALAKIKAIAAKNLQFKNFIGQGYYGTHTPSPILRNLLENPAWYTAYTPYQPEISQGRL
ESLLNFQTLVSDLTGMQIANASLLDEATAAAEAMTFCKRLSKNKAANTFFVSQHCHPQTL
DVLRTRAEPLGIDIEVGDEAAITDASAYFGALLQYPASNGDIFDYRALVERFHAANALVA
VAADLLALTLLTPPGEFGADVALGSAQRFGVPLGFGGPHAAYFATRDAFKRDMPGRLVGM
SVDRFGKPALRLAMQTREQHIRREKATSNICTAQVLLANIASMYAVYHGPKGLTEIAQRV
HSFTAILALGLTKLGHSVEQQHFFDTLSIKTGAKTAELHAKARAAGINLREIDAERLGLS
LDETTDQAAVEALLNLFAADQAAPAVSDLAAQIASRLPEGLLRQSAILQHEVFNRYHSET
ELMRYLRKLADKDLALDRSMIPLGSCTMKLNAASEMIPVTWPEFGNLHPFAPVEQAAGYT
QLTTELEAMLCAATGYDAVSLQPNAGSQGEYAGLLAIRAYHLSRGDDQRDICLIPQSAHG
TNPATASMAGMRVVVTACDARGNVDIADLKAKAEEHKDRLAAIMITYPSTHGVFEEGIRE
ICQIIHDNGGQVYIDGANMNAMVGLCAPGQFGGDVSHLNLHKTFCIPHGGGGPGVGPIGV
KSHLAPFLPGHAHMARKEGAVSAAPFGSASILPITWMYITMMGGNGLKRASQMAILNANY
IARRLEEHYPVLYSGEGGLVAHECILDIRPLKDSSGISVDDVAKRLIDFGFHAPTMSFPV
AGTLMIEPTESESKEELDRFCDAMIAIREEIRAVEQGRLDKDDNPLKNAPHTALELVGEW
HHAYSREQAVYPLATLIEAKYWPPVGRVDNVYGDRNLVCACPSIEAYQDA
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagctcgatacccagaacgaattcatcgcccgccacattggcccgcgcgatgcc
gacaccgccgccatgctcgaactgctcggctacgattcggtcgacgcgctgaccggtgcc
gtgatccccgagagcatcaagggcaccagcatcctcggcgagcaaccgggcctgtcggaa
gccgacgccctggccaagatcaaggccatcgccgccaagaacctgcagttcaagaacttc
atcggccagggttactacggcacccacacgccgagcccgatcctgcgcaacctgctggaa
aacccggcctggtacaccgcctacaccccgtaccagccggagatttcccagggccgcctg
gagtcgctgctgaacttccagaccctggtcagcgacctcaccggcatgcagatcgccaac
gcatcgctgctggatgaagccaccgctgctgccgaggccatgaccttctgcaagcgtctg
tcgaagaacaaggctgccaacaccttcttcgtgtcccagcactgccacccgcagaccctc
gacgtgctgcgcacccgtgccgagccgctgggcatcgacatcgaagtcggcgacgaagcc
gccatcactgacgccagcgcctacttcggcgccctgctgcagtacccggcaagcaacggt
gacatcttcgactaccgcgccctggtcgagcgtttccacgccgccaacgccctggtggcc
gtggctgccgacctgctggccctgaccctgctcaccccgccgggcgagttcggtgccgac
gtggccctgggcagcgcccagcgcttcggtgtaccgctgggcttcggtggcccgcacgct
gcttacttcgccacccgcgacgcgttcaagcgcgacatgccgggccgcctggtcggcatg
tcggtcgaccgtttcggcaagccggccctgcgcctggccatgcagacccgcgagcagcac
atccgccgcgagaaggccaccagtaacatctgtaccgcccaggtgctgctggccaacatc
gctagcatgtatgccgtgtaccacggcccgaaaggtctgaccgagatcgcgcagcgcgta
cacagcttcaccgccatcctcgccctgggcctgaccaagctgggccacagcgtcgagcag
cagcacttcttcgacaccctgagcatcaagaccggcgccaagaccgccgagctgcatgcc
aaggcccgtgctgccggtatcaacctgcgcgagatcgacgccgagcgcctgggtctgtcg
ctggacgaaaccaccgaccaggccgccgtcgaggcgctgctcaacctgttcgccgccgac
caggccgcgcctgccgtcagcgacctggccgcacagatcgccagccgcctgccagaaggc
ctgctgcgccaatcggcgatcctgcagcacgaagtgttcaaccgctaccacagcgaaacc
gagctgatgcgctacctgcgcaagctggccgacaaggatctggccctggatcgcagcatg
atcccgctgggctcctgcaccatgaagctcaacgctgccagcgagatgatcccggtcacc
tggccggaattcggcaatctgcacccgttcgctccggtcgagcaggctgcgggttacacc
cagctgaccactgagctggaagccatgctctgcgccgccaccggctacgacgccgtgtcg
ctgcagcccaacgccggttcccagggcgagtacgccggtctgctggccatccgcgcctac
cacctgagccgtggcgacgatcagcgcgacatctgcctgatcccgcaatcggcccacggt
accaacccggcgaccgcctccatggccggtatgcgcgtggtggtgaccgcctgtgatgca
cgcggcaacgtcgacatcgctgatctcaaggccaaggccgaagagcacaaggatcgcctg
gctgcgatcatgatcacctacccgtccacccacggtgtgttcgaggaaggtatccgcgag
atctgccagatcatccacgacaacggcggccaggtttacatcgacggcgccaacatgaac
gccatggtcggcctctgcgccccaggtcagttcggcggcgacgtctcccacctgaacctg
cacaagaccttctgcatcccgcacggtggtggcggcccgggcgtcggcccgattggcgtc
aagtcgcacctggcgccgttcctgccgggccatgcgcacatggcccgcaaggaaggtgca
gtcagcgccgcgccgttcggcagcgccagcatcctgccgatcacctggatgtacatcacc
atgatgggcggcaacggcctcaagcgtgcatcccagatggccattctcaacgccaactac
atcgcccgtcgtctggaagagcactacccggtgctgtactccggtgaaggcggcctggtg
gcgcacgaatgcatcctcgacatccgtccgctcaaggacagcagcggcatcagcgtcgac
gacgtagccaagcgcctgatcgactttggtttccacgccccgaccatgtccttcccggtt
gccggcaccctgatgatcgagccgaccgagagcgagtccaaggaagagctggatcgcttc
tgcgacgccatgatcgccatccgtgaagaaatccgcgcggtcgagcaaggccgtctggat
aaagacgacaacccgctgaagaacgccccgcacaccgcgctggagctggttggcgaatgg
caccacgcctacagccgcgagcaggccgtgtacccgctggcgacgctgatcgaggccaag
tactggccgccggttggccgcgtggacaacgtctacggcgaccgcaacctggtctgcgcc
tgcccgtccatcgaggcgtatcaggacgcgtaa
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