Pseudomonas sediminis: HNQ25_17810
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Entry
HNQ25_17810 CDS
T07154
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psej
Pseudomonas sediminis
Pathway
psej00260
Glycine, serine and threonine metabolism
psej00460
Cyanoamino acid metabolism
psej00630
Glyoxylate and dicarboxylate metabolism
psej00670
One carbon pool by folate
psej00680
Methane metabolism
psej01100
Metabolic pathways
psej01110
Biosynthesis of secondary metabolites
psej01120
Microbial metabolism in diverse environments
psej01200
Carbon metabolism
psej01230
Biosynthesis of amino acids
psej01240
Biosynthesis of cofactors
psej04981
Folate transport and metabolism
Module
psej_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HNQ25_17810
09102 Energy metabolism
00680 Methane metabolism
HNQ25_17810
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HNQ25_17810
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HNQ25_17810
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HNQ25_17810
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HNQ25_17810
Enzymes [BR:
psej01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HNQ25_17810
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QNH00137
UniProt:
A0A7G7RBI5
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All DBs
Position
3791822..3793075
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AA seq
417 aa
AA seq
DB search
MFSKHDQLQGYDDALLAAIQAEEQRQEDHIELIASENYCSQRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDENGLIDYDEVERLAVEHKPKMIVAGFSAYSRV
LDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKTYQQQVIDNARAMAAV
FVERGYDVVSGGTDNHLMLISLVKQGLTGKAADAALGDAHITVNKNAVPNDPQSPFVTSG
IRIGTPAVTTRAFKEGECRTLAGWICDILDDLENPAVIERVRGQVADLCATYPVYAD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcacgaccaactgcaaggctatgacgacgccctgctcgcggcgatccag
gccgaagaacagcgccaggaagaccatatcgagctgatcgcctcggagaactactgcagc
cagcgcgtcatgcaggcgcaaggcagcggcctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggtggttgcgagcatgtggacaaggtcgaggcgctggccatcgaa
cgcgccaagcagctgttcggcgccgactacgccaacgtccagccgcactcgggctcttcg
gccaacagcgccgtgtacctcgcactgctcaatgcgggcgacaccattctcggcatgagc
ctggcccacggcggccacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtacggcatcgacgagaacggcctgatcgattacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaagatgatcgtcgccggcttctcggcctattcgcgcgtg
ctggacttcccgcgtttccgcgccatcgctgacaaggtcggcgcactgctgttcgtcgac
atggctcacgttgcgggcctggtcgccgccggtctgtaccccaacccggtgccgttcgcc
gacgtcgtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatcctg
gcgcgcaagaacgaggagatcgagaagaagctcaactccgccgtcttccctggcgcccag
ggcggcccgctgatgcacgtgatcgcggccaaggcggtgtgcttcaaggaagcactggag
ccaggcttcaagacctaccagcagcaagtgatcgacaacgcccgcgccatggcggcggtg
ttcgtcgagcgcggctatgacgtagtttccggcggtaccgacaaccacctgatgctgatc
agcctggtcaagcagggtctgactggcaaagcggccgacgcggcgctgggcgatgcccac
atcaccgtgaacaagaacgccgtgccgaacgacccacagtcgccgttcgtcacctccggc
atccgtatcggtaccccggcggtgaccacccgcgctttcaaggaaggcgaatgccgcacc
ctcgccggttggatctgcgacatcctcgacgacctggaaaacccggccgtgatcgagcgc
gtacgcggccaggtcgccgacctgtgcgccacctacccggtctacgctgactga
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