Pseudomonas sediminis: HNQ25_18185
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Entry
HNQ25_18185 CDS
T07154
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
psej
Pseudomonas sediminis
Pathway
psej00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HNQ25_18185 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psej01007
]
HNQ25_18185 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psej03016
]
HNQ25_18185 (aspS)
03029 Mitochondrial biogenesis [BR:
psej03029
]
HNQ25_18185 (aspS)
Enzymes [BR:
psej01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
HNQ25_18185 (aspS)
Amino acid related enzymes [BR:
psej01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HNQ25_18185 (aspS)
Transfer RNA biogenesis [BR:
psej03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HNQ25_18185 (aspS)
Prokaryotic type
Other AARSs
HNQ25_18185 (aspS)
Mitochondrial biogenesis [BR:
psej03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
HNQ25_18185 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QNH00207
UniProt:
A0ABX6SFH3
LinkDB
All DBs
Position
complement(3859424..3861199)
Genome browser
AA seq
591 aa
AA seq
DB search
MMRSHYCGQLNESLDGQEITLCGWVHRRRDHGGVIFLDIRDREGLAQVVFDPDRAETFAK
ADRVRSEYVVKITGKVRLRPEGARNANMASGAIEVLGYELEVLNEAETPPFPLNEYTDVG
EETRLRYRFIDLRRPEMAEKLKLRSRITSSIRRYLDDNGFLDVETPILTRATPEGARDYL
VPSRTHAGSFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQIDIETS
FLDEKDIMDITETMVRNLFKEVLDVEFGELPHMTLAEAMRRFGSDKPDLRIPLELVDVED
QLKDVEFKVFAGPANDPKCRVTALRVPGGASMPRKQIDDYTKFVGIYGAKGLAYIKVNER
AAGVDGLQSPIVKNIPLDNINVILDRVGAVDGDIVFFGADKAKVVSEALGALRIKLGHDL
NLLTCEWAPLWVVDFPMFEENDDGSLTAMHHPFTSPSCSPEELEANPSAALSRAYDMVLN
GTELGGGSIRIHDKAMQQTVFRVLGISEEEQQEKFGFLLDALKYGAPPHGGLAFGLDRLV
MLMTGASSIREVIAFPKTQSAACVMTQAPGIVDNKSLRELHIRLREQPKAE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcagccactattgcggccagttgaacgagagcctggatggccaggaaatcacc
ctttgcggctgggtacaccgtcgccgtgaccatggcggggtgattttcctcgatatccgt
gatcgtgaaggcctggctcaggtggtattcgatcctgatcgtgccgagaccttcgccaag
gccgaccgtgtacgtagcgaatatgtagtcaaaatcaccggcaaggtacgcctgcgtccg
gaaggcgcgcgcaacgccaacatggccagcggtgccatcgaagtgctgggctacgagctg
gaagtgctcaacgaggcggaaaccccgccgttcccgctcaacgaatacaccgacgtcggt
gaagaaacccgcctgcgctatcgcttcatcgatctgcgtcgcccggaaatggccgagaag
ctcaagctgcgctcgcgcatcacttcgagtatccgtcgctacctcgacgacaacggcttc
cttgacgtcgaaacgccgatcctgacccgcgctacccctgaaggtgcgcgcgactatctg
gtaccgagccgcacccacgccggcagtttcttcgccctgccgcagtcgccgcagctgttc
aagcagttgttgatggtcgccggcttcgatcgctactaccagatcgccaagtgcttccgc
gacgaagacctgcgtgccgaccgtcagccggagttcacccagatcgacatcgagaccagc
ttcctcgatgaaaaagacatcatggacatcaccgagaccatggtgcgcaacctattcaag
gaagtgctggacgtcgaattcggcgaattgccgcacatgaccctggccgaagccatgcgc
cgctttggctcggacaagccggacctgcgtatcccgctggagctggtcgatgtggaggat
cagctcaaggacgtcgagttcaaggtattcgccggcccggccaacgatccgaaatgccgc
gtcaccgcgctgcgcgttccgggcggggcgagcatgccgcgcaagcagatcgacgactac
accaagttcgtcggcatctacggtgccaagggcctggcctacatcaaggtcaacgagcgt
gctgccggcgttgacggtttgcagtcgccgatcgtcaagaacatcccgctggacaacatc
aatgtcatcctcgatcgcgttggcgctgtcgatggcgatatcgtgttctttggcgccgac
aaggccaaggtcgtcagcgaggccctgggcgcgctgcgtatcaagctgggtcatgatctg
aacctgctgacctgcgagtgggcgccgctgtgggtcgtcgacttcccgatgttcgaggaa
aacgacgacggcagcctgaccgccatgcaccacccgttcacctcgccgagctgcagcccc
gaggagctggaagccaacccttccgccgcattgtcgcgcgcctatgacatggtgctcaac
ggcaccgagctgggtggcggttcgatccgtatccacgacaaagccatgcagcagacggtg
ttccgcgtgctcggcatcagcgaagaggagcagcaggagaagttcggcttcctgctcgac
gcactgaagtacggtgcgccgccccatggtggcctggcctttggcctggatcgtctggtg
atgctaatgaccggtgcttcgtcgattcgtgaagtgatcgccttcccgaaaacccagagc
gcggcctgtgtcatgacccaggcgccgggcatcgtcgacaacaagtctctgcgcgagctg
catatccgcctgcgcgagcagcccaaggccgaataa
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