Pseudomonas sediminis: HNQ25_18510
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Entry
HNQ25_18510 CDS
T07154
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_18510
Enzymes [BR:
psej01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
HNQ25_18510
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
HNQ25_18510
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QNH00270
UniProt:
A0A7G7RBW8
LinkDB
All DBs
Position
complement(3929508..3931043)
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AA seq
511 aa
AA seq
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MSARRLILILGDQLTHGLGALKDIDREHDHVLLAEVMEEASHVPHHPKKIALIFSAMRHF
AEALREQGQQVHYVALDDPDNTGSLPGELLRWTQRLDPAEVHLTECGDWRLEQALRHCGV
PIHWHQDSRFLCSRDAFAAWAKGRKQLRMEFFYREMRRDSGLLLNPDGTPEGGAWNFDAD
NRKALPKGVRPPAPLSIEPDAITRDVLALVERRFTSHYGSLEGFDYPVTAEQAERLWQYF
LAHGLADFGDYQDAMADGEPFLFHSRISAALNIGLLDLRRICAEVEAAYRAGDVPLNAAE
GFIRQLIGWREYVRGIYWLRMPEYAEGNRFGNSRALPEFYWTGKTRMNCMRQAIGQTLEH
AYAHHIQRLMVTGNFALLAGIAPKAICDWYLAVYMDAFDWVELPNTLGMVMHADGGYLGS
KPYCASGHYIKRMSNHCQGCSYKVSESTGESACPFNALYWHFLMRHREPLERNPRIGMVY
RNLARMTEAKQQALWDWGERLLAKLDGGEML
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgcgcgccgtctgattctgatcctgggtgaccagcttacccacggcctcggtgca
ttgaaggacatcgaccgcgagcacgaccacgtgctgctggccgaagtgatggaagaggcc
agtcatgtaccgcatcacccgaagaagatcgccctgatcttcagcgccatgcgccatttc
gccgaagccttgcgtgagcagggccagcaggtgcattacgtggccctggacgatccggac
aacacgggctcgttgccgggcgagctgctgcgctggacgcaacggctcgaccctgccgag
gtgcatctgaccgagtgcggcgactggcgcctggagcaggcgctgcgtcattgcggcgtg
ccgatccactggcatcaggacagccgctttctctgcagccgcgatgcgttcgctgcctgg
gccaaggggcgcaagcagttgcgcatggagttcttctaccgtgagatgcgccgtgacagc
gggctgctgctcaaccccgacggcacgccagagggcggtgcctggaacttcgatgcggac
aaccgcaaggcattgcctaaaggcgtgcgtccacccgcgccgctgagtatcgagccggat
gccatcacccgtgatgtactggcgctggtcgagcggcgcttcaccagccattacggcagc
ctggagggtttcgattatccggtcacggccgagcaggccgaacgcctctggcagtatttt
ctggcccatggcctggcagacttcggtgactaccaggacgccatggccgacggtgagccc
tttctcttccactcgcgcattagcgctgcgctgaacatcggcttgctcgatctgcggcgg
atctgcgccgaggtcgaggccgcctatcgtgccggcgacgtgccgctgaacgccgccgaa
ggcttcatccgtcaactgatcggctggcgcgaatacgtgcgcggcatctactggctacgt
atgccggagtacgccgagggcaaccgctttggcaattcacgagcgctgcccgagttctac
tggaccggcaagacgcggatgaactgcatgcgtcaggccatcggccagaccctggagcat
gcctacgcgcaccatatccagcggctgatggtcaccggcaacttcgccttgctcgctggc
atcgcgcccaaagccatctgtgactggtacctggccgtgtatatggacgccttcgactgg
gtggagctgcccaacactctgggcatggtgatgcatgccgacggtggctacctcggctcc
aagccttattgcgccagtggtcattacatcaagcgcatgtccaaccattgccagggctgc
agctacaaggtgagcgagagcaccggcgaatcggcctgcccgttcaacgcgctgtactgg
cattttctaatgcgccaccgcgagcccctggagcgtaacccgcgcattggcatggtctac
cgcaacctggcgcgcatgaccgaggccaagcagcaggcgctgtgggactggggcgagcgc
ctgctggccaagctcgatggcggggagatgctgtga
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