Pseudomonas sediminis: HNQ25_20180
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Entry
HNQ25_20180 CDS
T07154
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
psej
Pseudomonas sediminis
Pathway
psej00330
Arginine and proline metabolism
psej00480
Glutathione metabolism
psej01100
Metabolic pathways
psej01110
Biosynthesis of secondary metabolites
psej04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
HNQ25_20180
09106 Metabolism of other amino acids
00480 Glutathione metabolism
HNQ25_20180
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
HNQ25_20180
Enzymes [BR:
psej01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
HNQ25_20180
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
QNH00583
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Position
complement(4277112..4278275)
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AA seq
387 aa
AA seq
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MSIKVEDYYAPATFQRMKAFADQHETPFVVIDRQIIADAYDQLGNCFPFAKIYYAVKANP
ATEIIELLRDKGSSFDIASIYELDKVMATGVGPERISYGNTIKKSRDIRYFFDKGVRLFA
TDSEADLRNIAKAAPGSKIYVRILTEGSTSADWPLSRKFGCQPDMALDLLILAKQLGLVP
YGISFHVGSQQRDIDVWDAAVAKVKVIFERLKEEDGITLQMINMGGGFPANYIQRTNDLE
TYAEEITRFLKEDFGDELPEIILEPGRSLIANAGVLVSEVVLVARKSRTAVERWVYADVG
KFSGLIETMDEAIKFPIWTEKKGEMEEVVIAGPTCDSADIMYENYKYGLPLNLASGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSYYL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcaaggtcgaagactattacgcacccgccactttccagcgcatgaaggcgttc
gccgatcagcacgaaactccgttcgtggtgatcgaccgtcagatcatcgccgatgcctac
gatcagctgggcaactgcttcccgtttgccaagatctactacgcggtcaaggccaacccg
gccaccgagatcatcgagttgctgcgcgacaagggttcgagcttcgacatcgcctcgatc
tacgagctggacaaggtcatggccaccggtgtcggccccgagcgcatcagctacggcaac
accatcaagaaatcccgcgatattcgttacttcttcgacaagggcgtgcgcctgttcgcc
accgactccgaagccgacctgcgcaacatcgccaaggccgcgccgggctcgaagatttat
gtgcgcattctcaccgagggctcgaccagtgccgactggccgctgagccgcaagttcggc
tgccagccggacatggccctggacctgctgatcctggccaagcaactgggcctggtgccc
tacggcatctccttccacgtcggttcgcaacagcgcgatatcgacgtgtgggatgcggcc
gtcgccaaggtcaaggtgatcttcgaacgcctcaaggaagaagacggcatcaccctgcag
atgatcaacatgggcggcggcttcccggccaactacatccagcgcaccaatgacctggaa
acctacgccgaggaaatcacccgcttcctcaaggaagacttcggtgatgaactgccggaa
atcatcctcgagccgggtcgttcgctgatcgccaacgccggtgtgctggtatcggaagtg
gtgctggtggcgcgcaagtcgcgtaccgccgtcgagcgttgggtgtatgccgacgtgggc
aagttcagcggcctgatcgaaaccatggacgaagccatcaagttccccatctggaccgag
aagaagggcgagatggaagaggtggtgatcgccggcccgacctgcgacagcgccgacatc
atgtacgagaactacaagtacggcctgccgctgaacctggccagcggtgaccgtctgtac
tggctgtccaccggtgcctacaccaccagctacagcgctgtggagttcaatggtttcccg
ccgctgaagtcttactacctgtaa
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