Pseudomonas sediminis: HNQ25_20430
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Entry
HNQ25_20430 CDS
T07154
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psej
Pseudomonas sediminis
Pathway
psej00260
Glycine, serine and threonine metabolism
psej00460
Cyanoamino acid metabolism
psej00630
Glyoxylate and dicarboxylate metabolism
psej00670
One carbon pool by folate
psej00680
Methane metabolism
psej01100
Metabolic pathways
psej01110
Biosynthesis of secondary metabolites
psej01120
Microbial metabolism in diverse environments
psej01200
Carbon metabolism
psej01230
Biosynthesis of amino acids
psej01240
Biosynthesis of cofactors
psej04981
Folate transport and metabolism
Module
psej_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HNQ25_20430
09102 Energy metabolism
00680 Methane metabolism
HNQ25_20430
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HNQ25_20430
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HNQ25_20430
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HNQ25_20430
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HNQ25_20430
Enzymes [BR:
psej01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HNQ25_20430
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
DegT_DnrJ_EryC1
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
QNH00628
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Position
4345289..4346542
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AA seq
417 aa
AA seq
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MFSRDLNLARYDAELFAAMEQEAQRQEEHIELIASENYTSPAVMEAQGSVLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANSAVYMALLNAGDTVLGMS
LAHGGHLTHGASVSFSGKIYNAVQYGINDQGLIDYDEVERLAVEHKPKMIIAGFSAYSQV
LDFPRFRAIADKVGAYLFVDMAHVAGLVAAGLYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEELEKKFNSAVFPGGQGGPLEHVIAAKAVCFKEALQPEFKAYQAQVIKNAQTMAQV
FIDNGYDVVSGGTENHLFLLSLIKQDITGKDADAALGRAFITVNKNSVPNDPRSPFVTSG
LRIGTPAVTTRGFKEDECRQLAGWICDVLANIGNDEVEGRVREQVKALCAQFPVYGN
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagccgtgatttgaacctcgctcgttatgacgccgaactctttgccgcgatggag
caagaagctcagcgccaggaagagcacatcgagctgatcgcctcggaaaactacaccagc
ccggcggtgatggaagcccagggcagcgtgctgaccaacaagtacgctgaaggctatccg
ggcaagcgttactacggtggctgcgagtacgtcgacgtggtcgagcaactcgccatcgac
cgcgccaaggaactgttcggcgccgactacgccaacgtccaacctcactccggcagccag
gccaacagcgccgtgtacatggccctgctcaacgcaggtgatactgtgctgggcatgagc
ctggcccacggcggccacctgacccacggtgccagcgtcagcttctccggcaagatctac
aacgccgtgcagtacggcatcaatgatcaaggcctgatcgactacgacgaagtagagcgc
ctagccgtcgagcacaagccgaagatgatcatcgccggcttcagcgcctactcgcaggtg
ctcgacttcccgcgtttccgcgccatcgctgacaaggtcggcgcctacctgttcgtcgac
atggctcacgtcgccggcctggtcgcagccggtctgtacccgaacccggtaccgttcgcc
gacgtcgttaccaccaccacgcacaagaccctgcgcggcccgcgcggcggcctgatcctg
gcgcgcaagaacgaagagctggagaagaagttcaactccgccgtattcccgggcggccag
ggcggcccgctggagcacgtcattgccgccaaggccgtgtgcttcaaggaagccctgcag
cctgagttcaaggcttaccaggcgcaggtgatcaagaacgcccagaccatggctcaggtg
ttcatcgacaatggctacgacgtggtttccggcggcaccgagaaccacctgttcctgctc
tcgttgatcaagcaggacatcaccggcaaggatgctgacgccgccctgggtcgcgccttc
atcaccgtcaacaagaacagcgtgccgaacgatccgcgttcgccgttcgtcacctccggc
ctgcgtatcggtacacctgctgtcaccactcgcggcttcaaggaagacgagtgccgtcaa
ctggcaggctggatctgcgacgtactggccaacatcggcaacgatgaagtcgaaggccgc
gtacgcgagcaggtcaaagccctgtgcgcccagttcccggtctacggcaactaa
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