Pseudomonas sediminis: HNQ25_20450
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Entry
HNQ25_20450 CDS
T07154
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psej03400
]
HNQ25_20450 (radA)
DNA repair and recombination proteins [BR:
psej03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HNQ25_20450 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
AAA_16
AAA_22
DnaB_C
SLFN-g3_helicase
GvpD_P-loop
AAA
Rad51
RecA
AAA_24
nSTAND3
AAA_14
NTPase_1
DUF7125
MCM
NB-ARC
AAA_29
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QNH00632
UniProt:
A0A7G7RCY0
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Position
complement(4347982..4349340)
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AA seq
452 aa
AA seq
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MAKAKRMYGCTECGATFPKWAGQCGECGAWNTLVETVVEGATPSGRTGWAGDKANIKTLA
EVSVEEIPRFSTASGELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIAQRFPALY
VTGEESQQQVAMRARRLDLPQDKLKVMTETCIETIIATARQEKPKVMVIDSIQTIFTEQL
QSAPGGVAQVRESAALLVRFAKQSGTAIFLVGHVTKEGALAGPRVLEHMVDTVLYFEGES
DGRLRLLRAVKNRFGAVNELGVFGMTDKGLKEVSNPSAIFLTRAQEAVPGSVVMATWEGS
RPMLVEVQALVDTSHLGNPRRVTLGLDQNRLAMLLAVLHRHGGIPTYDQDVFLNVVGGVK
VLETASDLALMAAVISSLRNRPLQHDLLVFGEIGLSGEIRPVPSGQERLKEAAKHGFKRA
IVPKGNAPKEAPPGLQIVAVTRLEQALDALFE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcaaaacgcatgtacggctgcaccgagtgtggcgccactttccccaagtgg
gccgggcagtgtggcgagtgcggcgcctggaataccctggtggaaaccgtggtcgagggc
gctacgcccagcggtcgcaccggctgggccggcgacaaggccaatatcaagaccctggct
gaagtcagtgtcgaggaaattccgcgtttttccaccgcttccggtgagctggatagggta
cttggcggtggcctggtcgatggctcggtggtgctgatcggtggtgacccaggcatcggc
aagtcgaccatcctgctgcagaccctgtgcaacatcgcccaacgcttccccgccttgtac
gttactggcgaggagtcgcagcagcaggtagcgatgcgtgcacggcggctggacctgccg
caggacaagctcaaggtcatgaccgagacctgcatcgagacgatcatcgccactgcccgc
caggaaaaacccaaggtgatggtgatcgactcgattcagaccatcttcaccgagcagctg
cagtcggcgccaggcggtgtcgcccaggtgcgcgagagtgcggcgctgttggtgcgtttc
gccaaacaaagcggtacggcgatctttctcgtcggccacgtgaccaaggaaggcgcgctg
gccggcccgcgcgtgctggagcacatggtcgataccgtgctgtatttcgagggtgagtcc
gacggtcgtctgcgcctgctgcgggcagtgaagaaccgtttcggcgcggtcaacgagctg
ggtgtgtttggcatgaccgacaagggcttgaaggaagtctccaacccctcggcgatcttc
ctcacgcgtgctcaggaggcggtgcccggtagtgtggtgatggccacctgggaaggctcg
cggccgatgctggtggaggtgcaggcgctggtcgacaccagccatctgggcaacccgcgc
cgcgtcaccctgggcctcgatcagaaccgtctggccatgctgctggcggtactgcatcgc
catggcggcatcccgacctatgaccaggacgtgtttctcaacgtggttggcggagtcaag
gtgctggaaacggcgtctgacctggcgttgatggcggcggtgatctccagcttgcgcaac
cggcctttgcagcacgacctgctggtgttcggcgagatcggtctgtctggcgagatccgc
ccggtgccgagtggtcaggaacgcctgaaagaggcggccaagcacggcttcaaacgtgcc
atcgtgcccaaaggcaacgcgcccaaggaggcgccgcctgggctgcagatcgtcgctgtc
acgcgattggaacaggcgctggatgcgctgttcgaataa
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