Pseudomonas sediminis: HNQ25_22580
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Entry
HNQ25_22580 CDS
T07154
Name
(GenBank) RNA-binding transcriptional accessory protein
KO
K06959
protein Tex
Organism
psej
Pseudomonas sediminis
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
HNQ25_22580
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
S1_RRP5
HHH_7
YqgF
T2SSK
DUF22
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QNH01047
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Position
4834719..4837046
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AA seq
775 aa
AA seq
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MDSINNRIADELGVRPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRY
LRELDERRAAILASIEEQGKLTPELKREINLADTKTRLEDLYLPYKQKRRTKGQIALEAG
LGELADALFNDPNLAPEQEAERFIDAEKGFADVKAVLEGAKYILMERFAEDAALLDKLRS
FLKDNATLSARLVPGKENEGAKFSDYFEHDEALKGVPSHRALAIFRGRNEGILSSSLKVG
EELPGTLHPCELMIGERFGISAQGRPADKWLGEVVRWTWKVKLYSHLETDLLGELREKAE
DEAIAVFARNLHDLLLAAPAGPRATLALDPGLRTGCKVAVVDATGKVLETATVYPHAPRN
DWDGTLAILAKLCAKHGVDLISIGNGTASRETDKLAAELIKKVPGLKLTKVMVSEAGASV
YSASELAAREFPDLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARS
LDAVVEDCVNAVGVDVNTASAALLARISGLNTTLAQNIVQYRDANGAFASRAALKQVPRL
GEKTFEQAAGFLRVMNGDNPLDASAVHPETYPLVERIAAGTERDIRSLIGDSGFLKRLDP
AKFTDERFGLVTVGDILKELDKPGRDPRPEFKTAEFQEGVETLKDLELGMVLEGVVTNVT
NFGAFVDIGVHQDGLVHISALSEKFIKDPHEAVKAGDVVKVKVMEVDIPRNRIALSMRMG
DTPGEKVEGARGGQSRGGNRGGNTPRSERHSSQDKPAPATGGMAALFANAKQLKK
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggatagcatcaacaaccgtatcgccgatgaactgggcgtgcgcccgcaacaggttgcc
gccgccgtggccctgctcgacgaaggctccaccgtgcccttcatcgcccgttatcgtaaa
gaagtgaccggcagcctcgacgacacccagctgcgccacctggaagagcgcctgcgctac
ctgcgcgagctggacgagcgtcgtgcggcgatccttgccagcatcgaggagcagggcaag
ctgacccccgagctcaagcgcgagatcaacctggccgacaccaagacccgcctcgaagac
ctctacctgccgtacaagcaaaagcgccgcaccaagggccagatcgccctggaagccggc
ctcggcgagctggccgatgcactgttcaacgacccgaatctcgcgcccgagcaggaagcc
gagcgcttcatcgacgccgaaaagggcttcgccgacgtcaaggccgtgctcgaaggcgcc
aagtacatcctcatggagcgctttgccgaagacgccgcgctgctggacaagttgcgcagc
ttcctcaaggacaacgccaccctaagtgctcgcctagtgccgggcaaggaaaacgaaggc
gccaagttcagcgactacttcgagcacgacgaagcgctcaagggcgtgccgtcgcatcgt
gcgctggcgatcttccgcgggcgcaacgaaggcattctcagctccagcctgaaggtcggc
gaagagctgcccggcaccctgcatccgtgcgagctgatgatcggcgagcgcttcggtatc
agcgcgcaaggccgcccggcggataaatggctgggtgaggtggtgcgctggacctggaag
gtcaagctctatagccacctggaaaccgacctgctcggcgagctgcgcgagaaggccgag
gacgaggcgattgccgtgttcgcccgtaacctgcacgacctgctgctggctgccccggct
ggcccacgtgccaccctggcactcgacccgggcctgcgcaccggctgcaaggtggcggtg
gtcgacgccaccggcaaggtgctggaaaccgctactgtctacccgcacgcgccacgcaac
gactgggacggcaccctggccatcctcgccaagctctgcgccaagcatggcgtcgacctg
atctccatcggcaacggcaccgccagccgcgagaccgacaagctggccgccgagctgatc
aagaaggtgccgggcctgaagctgaccaaagtaatggtctccgaggccggcgcttcggtg
tattcggcctcggaactggccgcccgcgaattccccgatctcgacgtgtcgctacgcggc
gcagtgagcatcgctcgccgcctgcaggacccgctggccgaactggtgaagatcgacccg
aaatccattggcgtcggccaataccagcacgacgtgtcgcagctcaagctggcgcgtagc
ctggacgccgtggtcgaggactgcgtgaacgccgtcggcgtcgatgtgaacacagcctcc
gctgccctgctcgcgcgcatttccggcctcaacacgaccctggcgcagaacatcgtgcag
taccgcgatgccaacggcgccttcgccagccgcgcagcactcaagcaggtaccgcgcctg
ggcgagaagaccttcgaacaggctgccggcttcctccgcgtgatgaacggcgacaacccg
ctggacgcctctgccgtgcatccggaaacctatccgttggtcgagcgcatcgccgctggt
accgagcgcgatatccgctcgctgatcggcgattcgggcttcctcaagcgcctcgatccg
gccaagttcaccgatgagcgtttcggcctggtcaccgtcggcgacatcctcaaggaactg
gacaagcctggccgcgacccgcgcccggagttcaagaccgccgagttccaggaaggtgtg
gaaaccctcaaggacctcgaactgggtatggtgctcgaaggcgtggtaaccaacgtgacc
aatttcggcgccttcgtcgacatcggcgtacaccaggacggcctggtacacatcagcgcg
ctgtcggagaaattcatcaaggacccacacgaagcggtcaaggccggcgacgtggtcaag
gtcaaggtgatggaagtggatatcccgcgtaaccgcatcgccctgtccatgcgcatgggc
gataccccgggcgagaaagtcgaaggggcacgtggtggccagtcgcgcggtggcaaccgt
ggcggcaataccccacgcagcgagcgtcattccagccaggacaaaccggcacccgccacc
ggcggcatggccgccctgttcgccaacgccaagcagttgaagaaatga
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