Pseudomonas sediminis: HNQ25_23060
Help
Entry
HNQ25_23060 CDS
T07154
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psej
Pseudomonas sediminis
Pathway
psej00300
Lysine biosynthesis
psej00470
D-Amino acid metabolism
psej01100
Metabolic pathways
psej01110
Biosynthesis of secondary metabolites
psej01120
Microbial metabolism in diverse environments
psej01230
Biosynthesis of amino acids
Module
psej_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psej00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HNQ25_23060 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HNQ25_23060 (lysA)
Enzymes [BR:
psej01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HNQ25_23060 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QNH01139
UniProt:
A0ABX6SH73
LinkDB
All DBs
Position
4931941..4933188
Genome browser
AA seq
415 aa
AA seq
DB search
MEAFNYRDGELFAEGVALSALAQRFGTPTYVYSRAHIEGQYRAYADALAGMPHLVCFAVK
ANSNIGVLNVLARLGAGFDIVSSGELERVLAAGGEPSRIVFSGVGKSRDDMRRALEVGVH
CFNVESIVELERLQKVAAELGVKAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIEQAEA
VYARAAELPNLEVIGVDCHIGSQLTTLEPFLDALDRLLLLVDKLAARGITIKHLDLGGGL
GVQYRDEQPPLAGDYIAAVRKRLAGRDLSLVFEPGRFIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVSPVQPREGETRNYDLVGPICETGDFLAKDRQLALAEGD
LLAVRSAGAYGFVMSSNYNTRGRAAEVLVDGEQAYEVRRRETVQELYAGESLLPA
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagccttcaactaccgcgacggtgagctgttcgcggaaggcgttgccttgtctgcg
ctggcccagcgcttcggcacgcccacctacgtctactcgcgcgcccatatcgaggggcag
taccgcgcctatgccgatgccctggccggcatgccacacctggtctgcttcgcggtcaag
gccaactccaacatcggcgtattgaacgtgctggcgcgcctcggtgccggcttcgacatc
gtctccagcggtgagctggagcgcgtactggccgccggtggcgaaccgagccgcatcgtt
ttctccggcgttggcaagagccgcgacgacatgcgccgcgcgctggaagtcggcgtgcac
tgcttcaacgtcgagtccattgtcgagctggagcgcctgcagaaggtcgctgccgaactg
ggcgtcaaggcgcccgtctcgctgcgggtcaacccggacgtggacgccggcacccacccg
tacatttccaccggcctcaaggaaaacaagttcggcatcgacatcgagcaggccgaggcg
gtttacgcccgcgccgccgagctgccgaacctggaagtgatcggcgtcgactgccacatc
ggctcgcagctgaccaccctcgagcccttcctcgacgccctggatcgcctgctgctgctg
gtcgacaagctggccgcgcgcggtatcaccatcaagcacctggatctgggcggcggcctc
ggtgtgcagtaccgcgacgaacaaccgccgctggccggcgattacatcgccgccgtgcgc
aagcgcctggcgggccgcgacctgtcgctggtattcgagccgggccgcttcatcgtcgcc
aacgccggcgtgctgctgactcaggtggaatacctcaagcacaccgaacacaaggacttc
gccatcgtcgatgcagcgatgaacgacctgatccgccccgccctgtatcaggcgtggatg
gacgtgtcgccggtgcagccgcgtgaaggcgagacgcgcaactacgacctggtcgggccg
atctgcgagaccggcgactttctggccaaggatcgtcagttggcgctggccgaaggtgac
ctgctggccgtgcgctcggcgggtgcctatggcttcgtcatgagctccaactacaacacc
cgcggccgcgccgccgaggtgctggtggatggtgagcaggcttacgaagtgcgtcgtcgc
gagaccgtccaagagctctatgccggcgaaagcctgctgccggcctga
DBGET
integrated database retrieval system