KEGG   Paraoerskovia sediminicola: GCM125_00110
Entry
GCM125_00110      CDS       T09128                                 
Symbol
vapc25_1
Name
(GenBank) ribonuclease VapC
  KO
K28143  ribonuclease VapC24/25/29/31/33/37/38/39/41/43/44/48 [EC:3.1.-.-]
Organism
psek  Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:psek00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:psek02048]
    GCM125_00110 (vapc25_1)
Prokaryotic defense system [BR:psek02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    GCM125_00110 (vapc25_1)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: BDZ40712
LinkDB
Position
11673..12101
AA seq 142 aa
MIAPDVTVLVGALVARHPHKHVCEPWLTAAIANPEPLALTDAVLGATVRILTHRRIYPNP
LPATAALDLVEGLLAAPGTIRIGPGPRHWEIFGQLCRGSDVHGNLVADAQHASVAIEHGA
TWATLDRDFARFPGLRVVDPRA
NT seq 429 nt   +upstreamnt  +downstreamnt
atgatcgctccggacgtcaccgtcctcgtcggcgcactcgtcgcacgccatccgcacaag
cacgtgtgcgagccgtggctgaccgcggcgatcgcgaaccccgaaccgctcgctctcacg
gacgccgtcctcggtgccacggtgcggatcctcacccaccggcgcatctacccgaacccg
ctgcccgccactgccgcgctcgacctcgtcgagggcctgctggccgcaccggggaccatc
cggatcgggccggggccgcgccactgggagatcttcgggcagctctgccggggctccgac
gtccacggaaacctggtcgccgacgcacagcacgcctccgtcgcgatcgagcacggcgcg
acgtgggcgacgctcgaccgggacttcgcccggttccccggtctgcgcgtcgtcgacccg
cgcgcctga

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