Paraoerskovia sediminicola: GCM125_02210
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Entry
GCM125_02210 CDS
T09128
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00020
Citrate cycle (TCA cycle)
psek00190
Oxidative phosphorylation
psek00650
Butanoate metabolism
psek00720
Other carbon fixation pathways
psek01100
Metabolic pathways
psek01110
Biosynthesis of secondary metabolites
psek01120
Microbial metabolism in diverse environments
psek01200
Carbon metabolism
Module
psek_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psek_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psek_M00149
Succinate dehydrogenase, prokaryotes
psek_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GCM125_02210
00650 Butanoate metabolism
GCM125_02210
09102 Energy metabolism
00190 Oxidative phosphorylation
GCM125_02210
00720 Other carbon fixation pathways
GCM125_02210
Enzymes [BR:
psek01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
GCM125_02210
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Thi4
DAO
Pyr_redox_2
DUF6020
DUF7075
Motif
Other DBs
NCBI-ProteinID:
BDZ40922
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All DBs
Position
199820..201652
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AA seq
610 aa
AA seq
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MQTHQYDVVIVGAGGAGMRAALEASGEVRTAVISKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLERMGLPFNRTPEGRIDQRRFGGHT
RNHGEAAVRRSCYAADRTGHMILQTLYQNCVKQDVEFFNEFYVLDLITDHDLSEGDVPDG
EEVNATGVVAYDLATGEIHVFQAKSIVFATGGAGKIFKTTSNAHTLTGDGMALALRRGFP
LEDMEFFQFHPTGLAGLGILLSEAARGEGGILRNSDGERFMERYAPTIKDLAPRDIVARS
MANEVREGRGCGPNKDYVLLDLTHLEPAHIDAKLPDITEFARTYLGIEPYTEPVPVYPTA
HYAMGGIPTNVDAEVLRDSHNVVKGLYAAGEVACVSVHGSNRLGTNSLLDINVFGKRAGR
TAAAYAKTATFRDLPEDAAARTVAQLDEMRDRPDGARVAEVRRELQETMDANAQVFRTGE
SLAQALDDIRGLQERFKTVSVQDKGKMFNTDLLEALELGFLLDIAEVTVVAAINRKESRG
GHYREDFPDRDDTNYMLHTMTYRRPTDAPDAVDGTVGEYFDHVESFDGYKVVLGSKPVIQ
TRYEPMERKY
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcagacccatcagtacgacgtcgtgatcgtcggtgccggcggcgccgggatgcgcgcg
gccctcgaggcctcgggcgaggtccgtacagccgtcatctcgaagctctacccgacgcgc
tcgcacacgggagcggcgcagggcggcatgtgcgccgcgctggcgaacgtcgaggaggac
aactgggagtggcacacgttcgacacggtcaagggcggcgactacctggtcgaccaggac
gcggccgagatcatggccaaggaggccatcgacgccgtgctcgacctcgagcgcatgggt
ctgccgttcaaccgcacccctgagggccgcatcgaccagcgccgcttcggcgggcacacg
cgcaaccacggcgaggccgccgtccggcgctcgtgctacgcggccgaccgcaccggccac
atgatcctgcagacgctctatcagaactgcgtcaagcaggacgtcgagttcttcaacgag
ttctacgtcctcgacctcatcaccgaccacgacctctccgagggcgacgtgccggacggc
gaggaggtcaacgcgaccggcgtcgtcgcctacgacctcgcgaccggcgagatccacgtg
ttccaggcgaagtcgatcgtgttcgccacgggcggcgcgggcaagatcttcaagaccacc
tcgaacgcccacacgctgacgggcgacggcatggctctggcgctgcgccgcgggttcccg
ctggaggacatggagttcttccagttccacccgacgggcctggccgggctcgggatcctg
ctctccgaggccgcgcgcggcgagggcgggatcctccgcaactcggacggcgagcggttc
atggagcgctacgcgcccaccatcaaggacctcgcgcctcgcgacatcgtggcgcgctcg
atggcgaacgaggtccgcgagggtcggggctgcggcccgaacaaggactacgtgctcctc
gacctgacgcacctggagcccgcgcacatcgacgcgaagctcccggacatcaccgagttc
gcccgcacgtacctcggcatcgagccgtacaccgagcccgtcccggtctacccgaccgcg
cactacgcgatgggcggcatcccgaccaacgtcgacgcggaggtgctgcgcgactcgcac
aacgtcgtcaagggcctgtacgccgccggcgaggtcgcctgcgtctccgtccacggttcg
aaccgcctcgggaccaactcgctgctcgacatcaacgtcttcggcaagcgcgccgggcgc
acggccgccgcgtacgcgaagaccgccacgttccgcgacctgcccgaggacgcggccgcg
cgcaccgtcgcgcagctcgacgagatgcgtgaccggcccgacggcgcacgcgtcgccgag
gtgcggcgcgagctgcaggagacgatggacgcgaacgcccaggtgttccgcaccggggag
tcgctcgcgcaggcgctcgacgacatccgcgggctgcaggagcggttcaagaccgtctcg
gtgcaggacaagggcaagatgttcaacacggacctcctcgaggcgctcgagctcgggttc
ctgctcgacatcgccgaggtcaccgtcgtcgccgcgatcaaccgcaaggagtcccgcggg
ggccactaccgcgaggacttcccggaccgcgacgacaccaactacatgctgcacaccatg
acgtaccggcgccccacggacgccccggacgccgtggacgggacggtcggggagtatttc
gaccacgtggagtcgttcgacggctacaaggtcgtcctcggctcgaagcccgtgatccag
acccgctacgagccgatggagcggaagtactga
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