Paraoerskovia sediminicola: GCM125_04400
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Entry
GCM125_04400 CDS
T09128
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek03030
DNA replication
psek03430
Mismatch repair
psek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM125_04400
03430 Mismatch repair
GCM125_04400
03440 Homologous recombination
GCM125_04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psek03032
]
GCM125_04400
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_04400
Enzymes [BR:
psek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM125_04400
DNA replication proteins [BR:
psek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM125_04400
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM125_04400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
BDZ41141
UniProt:
A0ABN6X8R8
LinkDB
All DBs
Position
435370..436122
Genome browser
AA seq
250 aa
AA seq
DB search
MRDMGSRDTGSSGGGWTSGPLIGFDTETTGVDVTTDRVVTAALVLRAPGRPASSRTWLID
PGVEIPAEAAAIHGITTAHARAHGSAPAPALDEIADEIVAALRADTPVVAYNAAFDLSIL
DAELRRHALPTLRERLGHEVGPVIDPLVLDRALVRKRYGKRRLGDLCLHYGVTAGAGGLH
SADVDVEATLDVLAAIVADHPWVSTKDLAEIHRFQVGAHRTWADDFNAWRRRQGFEGAGA
STAWPYYDLV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgagggacatgggttcgagggacacgggttcgagcggtgggggctggacgagcggtccg
ctgatcgggttcgacaccgagaccaccggggtcgacgtgacgaccgaccgcgtcgtcacg
gccgcgctcgtgctccgcgcgccggggcggcccgcgtcgtcccggacctggttgatcgac
ccgggggtcgagatccccgccgaggcggccgccatccacggcatcacgaccgcgcacgcc
cgcgcgcacggcagcgcgcccgcccccgcgctcgacgagatcgccgacgagatcgtggcg
gcgctgcgcgccgacaccccggtcgtggcgtacaacgcggcgttcgacctgtcgatcctc
gacgccgagctccgccggcacgcgctgccgacgctgcgcgaacggctggggcacgaggtc
gggccggtcatcgacccgctcgtcctggaccgcgcgctggtgcgcaagcggtacggcaag
cgccggctcggcgacctgtgcctgcactacggcgtcaccgccggcgccggagggctccac
tcggccgacgtggacgtcgaggcgacgctggacgtgctcgcggcgatcgtcgcggaccac
ccctgggtctcgacgaaagaccttgccgagatccaccgcttccaggtcggcgcacaccgc
acgtgggccgacgacttcaacgcgtggcggcggcgccagggcttcgagggggccggcgcg
tccacggcgtggccctactacgacctggtgtga
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