Paraoerskovia sediminicola: GCM125_06240
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Entry
GCM125_06240 CDS
T09128
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
psek
Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_06240 (radA)
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GCM125_06240 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
ChlI
AAA_22
Lon_C
AAA_16
AAA
NACHT
TniB
Rad51
AAA_24
RTP1_C2
ABC_tran
MMR_HSR1
AAA_29
DUF7125
Isochorismatase
NTPase_1
nSTAND3
AAA_19
SLFN-g3_helicase
RsgA_GTPase
AAA_5
RecA
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
BDZ41325
LinkDB
All DBs
Position
610811..612151
Genome browser
AA seq
446 aa
AA seq
DB search
MKTTTRATAKTARPAYRCSECGWTTAKWVGRCGECQEWGSVSEAGAAATGPRTTAVQPTR
GPARPIGEIDVDATRAVPTGVGELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLSAASNVA
AGSASAPARTVLYVTGEESAGQVRLRAERIGALAPRLLLAAETDLASVLGHIEATDADLL
VVDSVQTIASTEVDGAPGGVSQVREVAGALIAAAKDRDLPVILVGHVTKDGTVAGPRTLE
HLVDVVCQFEGDRHSRLRFVRATKNRYGPTDEVGCFDLSESGIVGLPDPSGLFLSHGAAR
TPGTCLTVTLDGRRPLALEIQSLVVPSPLANPRRTTSGIESSRLAMILAVMHRHAGARLG
DHDVYVSTIGGARVSEPAADLAIAVATVSAKEDEALPQGTLAFGEVGLAGDIRPVTGLDR
RLNEAARLGFTRAIVPARSGARPRRA
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgaagacgaccacgcgcgccacggccaagaccgcccgtcccgcctaccggtgcagcgag
tgcggttggaccacggccaagtgggtcggcaggtgcggcgagtgccaggagtgggggtcg
gtcagcgaggccggcgcggccgccaccgggcctcggacgacggcggtgcagcccacgcgc
gggccggcccgcccgatcggcgagatcgacgtcgacgcgacgcgcgcggtgccgaccggg
gtcggcgagctcgaccgcgtcctcggcgggggtctcgtcccaggagccgtcgtcctcctc
gccggcgagccgggggtcggcaagtccacgctcctcctgtcggcggcgagcaacgtcgcc
gcgggctccgcctccgcacccgcgcgcacggtcctctacgtcaccggcgaggagtcggcc
ggtcaggtacggctccgcgccgagcgcatcggagccctcgcgccgcgcctcctcctcgcg
gccgagaccgacctcgcgagcgtcctcggccacatcgaggccacggacgccgacctgctc
gtcgtggactcggtccagaccatcgcgtcgacggaggtcgacggcgcgcccggcggcgtg
tcccaggtccgcgaggtcgccggcgcgctcatcgctgcggccaaggaccgggacctgccg
gtcatcctggtggggcacgtcacgaaggacgggaccgtggccggtccgcggacgctcgag
cacctcgtcgacgtcgtctgccagttcgagggcgaccggcactcccggctcaggttcgtc
cgggccacgaagaaccgctacggaccgaccgacgaggtcggctgcttcgacctctcggag
tcggggatcgtcggcctccccgacccgagcgggctgttcctctcgcacggcgcggcccgg
acacccggcacctgcctgaccgtgaccctcgacggccgtcgcccgctcgcgctggagatc
cagtccctcgtcgtcccgagcccgctcgccaacccgaggcggacgacctcgggcatcgag
tcgagcaggctcgcgatgatcctcgccgtcatgcaccggcacgccggtgcgcggctcggc
gaccacgacgtgtacgtctccacgatcggcggcgcccgcgtcagcgagccggcagccgac
ctggcgatcgccgtcgccaccgtctccgccaaggaggacgaggcgctgccccagggcacc
ctcgccttcggggaggtgggcctcgcgggcgacatccggcccgtcacggggctggaccgc
aggctcaacgaggccgcccggctcggcttcacgcgggcgatcgtccccgcccggtcggga
gcccgcccccggcgggcatga
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