Paraoerskovia sediminicola: GCM125_07560
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Entry
GCM125_07560 CDS
T09128
Name
(GenBank) dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
psek
Paraoerskovia sediminicola
Pathway
psek02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM125_07560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psek02000
]
GCM125_07560
Transporters [BR:
psek02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GCM125_07560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
nSTAND3
AAA_29
RsgA_GTPase
DUF87
AAA_5
Mg_chelatase
APS_kinase
Zeta_toxin
NACHT
AAA_18
SMC_N
nSTAND1
Thymidylate_kin
AAA_25
AAA_33
CPT
AAA
AAA_23
AAA_30
PRK
CoaE
TsaE
Sigma54_activat
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
BDZ41457
LinkDB
All DBs
Position
complement(765256..766395)
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AA seq
379 aa
AA seq
DB search
MPTPPTATDAASRRAGDPHDTEGDARPVLRAVKMRKHFPVRGFRSDKVVHAVDDVDLELY
AGRVVALVGESGSGKSTIARLLAQLMPTTAGQILLDGEDATARGRKSFRRYVKRVQMIFQ
DPFGSLNPVHTVRYHLTRSIRIHRGNLKGAEMEAALDELLDRVHLTPVDRYVDKYPHELS
GGQRQRVAIARALAADPDVLLADEPISMLDVSIRLGILNLLRDLRDRLGIAILYITHDIA
SARYFADKTLVMYAGRVVESGDSESVTQDPKHPYTQLLIGSAPDPDDMEARARGARGEAP
SLVTPPPGCRFNPRCPFATDLCRTELPPLMDVGEGRKAACWGYSDRPDRPELGSVLDAYG
ERPTVAASAAAHDSEEAAR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccccgcccacagccaccgacgcggcctcgcgtcgcgccggcgatccccacgac
acggagggcgacgcccggcccgtgctgcgcgccgtgaagatgcgcaagcacttccccgtg
cgcggcttccggtccgacaaggtcgtccacgccgtcgacgacgtggacctcgagctctac
gccggtcgcgtggtcgcgctcgtcggtgagtccggatcgggcaagtccacgatcgcgagg
ctcctggcgcagctcatgccgacgacggccgggcagatcctgctcgacggcgaggacgcg
accgcccgcggccgcaagagcttccgtcggtacgtcaagcgcgtgcagatgatcttccag
gaccccttcgggtcgctgaacccggtgcacacggtgcgctaccacctgacccgcagcatc
cggatccaccgcggcaacctcaagggcgccgagatggaggcggcgctcgacgagctgctc
gaccgcgtgcacctcacgcccgtcgaccgctacgtcgacaagtacccccacgagctctcg
ggcgggcagcggcagcgcgtcgcgatcgcacgcgcgctcgccgcggaccctgacgtcctg
ctggccgacgagccgatctcgatgctcgacgtgtcgatccggctcgggatcctcaacctc
ctgcgcgacctccgggaccgtctgggcatcgcgatcctctacatcacgcacgacatcgca
tccgcgcggtacttcgccgacaagacgctcgtgatgtacgccggccgggtcgtcgagagc
ggcgacagcgagtccgtcacgcaggacccgaagcacccgtacacgcagctgctcatcggc
tccgcgccggacccggacgacatggaggcgcgggcgcgcggagcgcgcggcgaggcgccg
agcctcgtgaccccgcccccgggatgccgcttcaacccccggtgcccgttcgccaccgac
ctgtgccgcaccgagctcccgccgctcatggacgtgggcgagggccgcaaggcggcctgc
tggggatactccgaccgtcctgaccgtcccgagctcggctccgtcctcgacgcgtacggc
gagcggcccacggtcgcagcgtccgcggctgcgcacgactccgaggaggcggcccgatga
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