Paraoerskovia sediminicola: GCM125_09090
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Entry
GCM125_09090 CDS
T09128
Name
(GenBank) hypothetical protein
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
psek
Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
psek03110
]
GCM125_09090
Chaperones and folding catalysts [BR:
psek03110
]
Heat shock proteins
HSP100
GCM125_09090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
Clp_N
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
ATPase_2
IstB_IS21
TniB
AAA_7
NBD_SMAX1
HOOK
AAA_24
AAA_25
T2SSE
TMF_TATA_bd
DNA_pol3_delta2
ABC_tran_CTD
Motif
Other DBs
NCBI-ProteinID:
BDZ41610
LinkDB
All DBs
Position
complement(925320..928976)
Genome browser
AA seq
1218 aa
AA seq
DB search
MDTKFTTMSQQAVADAIQSASAAKNPQLEPVHVLAALLAQQGGVAAGLLDAVGADTQAIG
QKVRAQLVALPSASGEAVSKPTASRATGTLMDLAGKEAEALGDEYVSTEHLLIGLAAGSS
PAAQILAAAGATAEALRDALPAVRGSGRVTSPNPEGTYKALEQYGVDLTAQARDGKLDPV
IGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVAGDVPTSLQGKRLVSL
DLAAMVAGAKYRGEFEERLKAVLEEISSSDGEVVTFIDELHTVVGAGAGGGDSSMDAGNM
LKPMLARGELRLVGATTLDEYREHVEKDPALERRFQQVYVGEPSVEDTVGILRGLKERYE
AHHKVTIADSALVAAAALSDRYITGRQLPDKAIDLVDEAASRLRMEMDSSPVEVDELQRA
VTRLEMEEVVLKESDDAASVERLARLRADLADRREELSALTARWESEKAGHNRIGDLRAR
IDELRTAADRAVREGDLETAGRLQYGEIPQVQRELADAEAEESADRAATEADAPEGATAE
AGAGRGVRQEAPMIADSVGADEIAEVVAAWTGIPAGRMLQGESEKLLHMEDEIGRRLIGQ
RAAVAAVSDAVRRSRAGVADPDRPTGSFLFLGPTGVGKTELAKSLADFLFDDERAMVRID
MSEYGEKHSVARLVGAPPGYVGYEEGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDLLLQV
LDDGRLTDGQGRTVDLRNVILVLTSNLGSQFLVDPTLDDSEKRDAVMAAVRASFKPEFLN
RLDDVVIFDPLDLEELGRIVDLAVERLAARLADRRITLDVTTQAREWLALEGFDPAYGAR
PLRRLVQREIGDRLARLLLAGEVADGAHVTVERAGAADEGVFVGSPGPVAGPASGPAAGS
SGGSSSASAEVACPRPHGDDEPPDRPVRGARALLGRCLPRPADRAASDADRLRADPQERG
VRHVDVPELDRLARTRCVDHGVAAGVDGDVAGGPDEVAGLGVLLGDPLAGVPLGGRRPRQ
GLDAGLLVDVLGEAGAVEAARGGAAVAVLGADVLRRLVDDAGAGLRDLDLEGLVRGLQAL
ALRGDDPDADGPLAGLRRLDLLRERVARTAGLRERDPLDGLARDLDDGLALDGPAVVGRA
QVDLRALLLVDDRAAGLVQLELRLGGGRLHGDRRGGDARRCAGRGRCGDGGRRRERRTPD
EHGGEQGAERQAAGAAAP
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
gtggacacgaagttcaccaccatgtcgcagcaggccgtggccgacgcgattcagagcgcg
tcggcggccaagaacccccagctcgagcccgtccacgtcctcgccgcgctcctcgcgcag
cagggcggtgtcgccgccgggctgctcgacgccgtcggcgccgacacccaggcgatcggc
cagaaggtccgcgcccagctggtcgcgctgccgagcgcctcgggcgaggccgtctccaag
cccaccgcctcgcgggccaccggcaccctcatggacctggccggcaaggaggccgaggct
ctcggcgacgagtacgtgtccaccgagcacctgctcatcggcctcgccgccggctcgtcg
cccgctgcgcagatcctcgccgccgccggcgcgaccgcggaggccctgcgggacgcgctg
cccgccgtgcgcggcagcggccgcgtcaccagcccgaacccggagggcacgtacaaggcc
ctcgagcagtacggcgtcgacctcaccgcgcaggcccgcgacgggaagctcgacccggtg
atcggccgcgactccgagattcgccgcgtcgtccaggtgctgagccgccgcaccaagaac
aaccccgtcctcatcggcgagcccggcgtcggcaagaccgccgtcgtcgagggcctcgcg
cagcgcatcgtcgccggcgacgtcccgacgtcgctccagggcaagcgcctcgtatccctc
gacctcgcggccatggtcgcgggcgccaagtaccgcggggagttcgaggagcgcctcaag
gcggtcctcgaggagatctcctcgtcggacggcgaggtggtcaccttcatcgacgagctc
cacaccgtcgtcggtgcgggcgcgggcggtggcgactcgtccatggacgccggcaacatg
ctcaagcccatgctcgcgcgcggcgagctgaggctcgtgggggcgaccacgctcgacgag
taccgcgagcacgtcgagaaggaccccgcgctggagcgccgcttccagcaggtgtacgtc
ggcgagccctcggtcgaggacaccgtcgggatcctgcgcggcctcaaggagcgctacgag
gcgcaccacaaggtgacgatcgccgactccgcgctcgtcgccgccgccgcgctctcggac
cgctacatcaccggccgccagctccccgacaaggccatcgacctcgtcgacgaggcggcg
tcccgcctgcggatggagatggactcgtcgcccgtcgaggtcgacgagctccagcgcgcc
gtgacgcgcctcgagatggaggaggtcgtgctcaaggagtcggacgacgcggcgtccgtc
gagcggctggcccgcctgcgcgcggacctcgccgaccggcgcgaggagctctccgcgctg
accgcccgctgggagtccgagaaggccgggcacaaccggatcggtgacctgcgcgcccgg
atcgacgagctgcgcaccgccgcggaccgggcggtccgcgagggcgacctcgagacggcg
ggacgcctccagtacggcgagatcccgcaggtgcagcgcgagctcgccgacgccgaggcc
gaggagagcgccgaccgtgccgccacggaggccgatgcccccgagggcgcgacggccgag
gccggcgcgggccgcggcgtccggcaggaggcgccgatgatcgccgacagcgtgggcgcc
gacgagatcgcggaggtcgtcgccgcctggaccgggatcccggcgggccggatgctccag
ggcgagtccgagaagctgctgcacatggaggacgagatcggccgccgcctcatcggccag
cgcgccgcggtcgccgcggtgtccgacgcagtgcggcgctcgcgggcgggggtcgccgac
ccggaccgcccgacgggctcgttcctgttcctcgggccgacgggcgtcggcaagacggag
ctcgcgaagtcgctcgcggacttcctgttcgacgacgagcgcgccatggtgcgcatcgac
atgtccgagtacggcgagaagcactcggtggcgcgcctcgtcggtgcgcccccggggtac
gtgggctatgaggagggcggccagctcaccgaggcggtccggcggcgcccgtactcggtg
gtgctgctcgacgaggtcgagaaggcccaccccgaggtcttcgacctgctgctccaggtg
ctggacgacggtcggctcaccgacgggcaggggcgcacggtggacctgcgcaacgtgatc
ctcgtgctcacgtcgaacctcggctcgcagttcctcgtcgacccgaccctcgacgactcc
gagaagcgcgacgccgtgatggccgcggtccgggcgtcgttcaagcccgagttcctgaac
cggctcgacgacgtcgtgatcttcgacccgctggacctcgaggagctggggcgcatcgtc
gacctcgccgtcgagcggctcgcggcgaggctcgcggaccggcgcatcacgctcgacgtg
acgacgcaggcgcgcgagtggctggcgctggaggggttcgaccccgcgtacggcgcgcgg
ccgctgcgcaggctcgtccagcgggagatcggcgaccggctcgcgcggctcctgctcgcg
ggcgaggtggcggacggcgcccacgtgacggtcgagcgtgccggtgcggcggacgagggt
gtcttcgtcggctcgccaggacccgttgcagggccggcttcagggccggcggcgggctcc
tccgggggctcgagctccgcgtcggctgaggtggcgtgcccacgcccgcacggcgacgac
gagcccccggaccgaccggtccggggggctcgtgcgctgctgggtcgctgtctgccgcga
cccgctgatcgtgcggcgtcagatgctgatcgccttcgagctgacccgcaggaacgtggg
gttcgacatgtagatgttccggaactggaccgtcttgcccggacgcggtgcgtcgatcat
ggtgttgccgccggcgtagatggcgacgtggccgggggcccagatgaggtcgccgggctt
ggcgtgcttcttggagatcctcttgccggcgtgccgctgggcggacgacgtccgcggcag
ggtcttgacgccggacttcttgtagacgtacttggtgaagccggagcagtcgaagccgct
cggggtggtgccgccgtagcggtacttggtgccgacgtgcttcgccgcctggtcgacgac
gcgggagccggtcttcgagaccttgaccttgaaggccttgttcgtggccttcaggccctg
gcccttcgaggggacgacccagacgcggatggtccgcttgccggacttcgtaggcttgat
cttcttcgagagcgtgtagctcgcacggccggtcttcgagagcgagatccgcttgacggt
cttgcccgagaccttgatgacggcctggcccttgacggccctgccgttgtgggtcgcgcg
caggttgatcttcgggctcttcttcttgtagatgatcgagctgcgggacttgtacagctt
gagcttcggcttggcggcggtcgacttcatggcgaccggcgcggcggcgacgctcgccgc
tgcgccggtcgtggccggtgcggcgacggcgggcgacgccgcgagcgacgcacccccgac
gagcacggtggcgagcagggcgctgagcgtcaggcggccggcgcggctgcgccgtga
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