Paraoerskovia sediminicola: GCM125_10010
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Entry
GCM125_10010 CDS
T09128
Symbol
hup
Name
(GenBank) DNA-binding protein HB1
KO
K03530
DNA-binding protein HU-beta
Organism
psek
Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psek03032
]
GCM125_10010 (hup)
03036 Chromosome and associated proteins [BR:
psek03036
]
GCM125_10010 (hup)
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_10010 (hup)
DNA replication proteins [BR:
psek03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GCM125_10010 (hup)
Chromosome and associated proteins [BR:
psek03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GCM125_10010 (hup)
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GCM125_10010 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF7342
DUF2267
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BDZ41702
LinkDB
All DBs
Position
complement(1029860..1030141)
Genome browser
AA seq
93 aa
AA seq
DB search
MALNKSDLVAAIAEKAGLSKADADKAVSALQDVLVDSLGKGEAVKITGLLSVERVERAAR
TGRNPRTGEEISIPAGYGVKVSAGSVLKKAVQK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaacaagtctgatctggtcgctgctatcgctgagaaggccggcctgtccaag
gccgacgccgacaaggccgtcagcgccctccaggacgttctcgtcgactcgctcggcaag
ggcgaggcagtgaagatcaccgggctgctctcggtcgagcgggtcgagcgcgctgctcgt
accggccgcaacccccgcaccggcgaggagatctcgatccccgcaggctacggcgtgaag
gtcagcgcgggctccgtgctgaagaaggccgtccagaagtga
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