Paraoerskovia sediminicola: GCM125_10190
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Entry
GCM125_10190 CDS
T09128
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00061
Fatty acid biosynthesis
psek00071
Fatty acid degradation
psek01100
Metabolic pathways
psek01212
Fatty acid metabolism
psek02024
Quorum sensing
psek04146
Peroxisome
Module
psek_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GCM125_10190
00071 Fatty acid degradation
GCM125_10190
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GCM125_10190
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM125_10190
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psek01004
]
GCM125_10190
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psek04147
]
GCM125_10190
Enzymes [BR:
psek01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GCM125_10190
Lipid biosynthesis proteins [BR:
psek01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GCM125_10190
Exosome [BR:
psek04147
]
Exosomal proteins
Exosomal proteins of breast milk
GCM125_10190
Exosomal proteins of breast cancer cells
GCM125_10190
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BDZ41720
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All DBs
Position
1046702..1048510
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AA seq
602 aa
AA seq
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MNPETATPTHRSRPWLAHYAPGVPATVTVPDEDLTSALVRAAERWPDRVAVDFFGATTTF
AELADETARAARVLADLGVRAGDRVALVMPNCAAHVAAFYGILRLGAIAVEHNPTYPVDQ
MRHQLTDSGATVALVWDGAVATVVEACDGTAVRHLVAVDMTRDLPTTKRLALRLPVSAAR
ETRTAMTGPVPAGTRRWHRLVAAAEPLPLDALDERPRPSSDDVALLQYTGGTTGVPKAAV
LTHRNLVANVVQGHAWAQFRPGEEVVHGVLPFFHAFGLTLCMTLPVAIGATLVPFPKFDP
DAVVASSRRRPATFMAGVAPMFDRLVDAAERSGHLDALTSIRLAFAGAMPISAATAARWE
AATGGLLIEGYGMTETSPVAVGNPCTAERTPGTLGLPFPSTDARVVVQGSPDEPSGPVDA
EPGADDGPEAGLVRGELLLRGPQVFSGYWQRPDESAGVLLDGGWIRTGDVVTQTPEGVLT
LVDRVKEMIITGGFKVFPSQVEDVLRGMPGIDDVAVVGMPDAGGAGSGDGSGSGGAGGTE
HVVAAIVISGVAPTLEAVRAWGEKHLARYALPRKIVVVRELPRSQIGKVLRRVVREDLLR
RP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctgagaccgcgacgccgacccaccgttcgcgaccgtggctcgcccactacgcc
ccgggcgtgcccgccaccgtgaccgtccccgacgaggacctcacgagcgccctggtccgg
gccgccgagcgctggcccgaccgggtcgcggtcgacttcttcggcgccaccacgacgttc
gcggagctcgccgacgagaccgcgcgagccgcccgcgtcctggcggacctcggggtccgc
gccggggaccgggtcgcactcgtcatgcccaactgcgccgcccacgtcgccgccttctac
gggatcctgcggctcggcgcgatcgccgtcgagcacaacccgacctaccccgtcgaccag
atgcgccaccagctcacggactccggggccaccgtcgccctggtctgggacggcgcggtg
gcgacggtcgtcgaggcctgcgacggcaccgccgtccgacacctcgtcgcggtcgacatg
acccgcgacctgccgaccacgaagcgtctcgcgctgcgcctgcccgtcagcgccgcgcgc
gagacccgcacagccatgaccgggcccgtgcccgccggcacacgccgctggcaccgcctc
gtcgccgcggccgagcccctgccgctcgacgccctcgacgagcgcccgcgcccgtcgtcg
gacgacgtcgccctcctgcagtacaccggcggcaccacgggcgtcccgaaggcagctgtg
ctcacccaccgcaacctggtcgcgaacgtcgtccagggccacgcgtgggcgcagttccga
cccggcgaggaggtcgtccacggggtcctgccgttcttccacgcgttcggcctgaccctg
tgcatgaccctcccggtcgcgatcggggcgaccctcgtgccgttcccgaagttcgacccg
gacgccgtcgtcgcgtcgtcgcgccggcgccccgccaccttcatggcgggcgtggctccc
atgttcgaccgcctcgtcgacgccgccgagcgctcggggcacctcgacgcgctcacgtcg
atccggctcgccttcgcgggcgccatgccgatctcggccgccacggcggcgcgctgggag
gccgccaccggcgggctgctcatcgagggatacggcatgacggagacgtccccggtcgcc
gtgggcaacccgtgcaccgccgagcgcacgccggggaccctgggactgccgttcccgagc
acggacgcgcgcgtcgtcgtccagggatcgcccgacgagccctcgggtccggtcgacgcg
gagcccggcgccgacgacgggcccgaggcgggcctcgtgcgcggcgagctgctgctgcgc
ggcccccaggtcttctccggctactggcagcgccccgacgagtccgccggcgtgctcctc
gacggcgggtggatccgcacgggtgacgtcgtcacccagacccccgagggcgtcctgacg
ctcgtcgaccgggtcaaggagatgatcatcaccggcggcttcaaagtcttcccgtcgcag
gtggaggacgtcctgcgcggcatgccgggcatcgacgacgtcgcggtcgtcggtatgccg
gacgccgggggcgcggggtccggcgacggttccggcagcggcggggcgggcggcacggag
cacgtcgtcgccgccatcgtcatctccggcgtcgccccgaccctcgaggccgtgcgcgcc
tggggcgagaagcacctcgcccggtacgcgctcccgcgcaagatcgtcgtcgtgcgcgag
ctgccgcgctcgcagatcggcaaggtgctgcgccgggtcgtccgcgaggacctgctgcgg
cggccgtga
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