Paraoerskovia sediminicola: GCM125_11890
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Entry
GCM125_11890 CDS
T09128
Name
(GenBank) hypothetical protein
KO
K05596
LysR family transcriptional regulator, chromosome initiation inhibitor
Organism
psek
Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psek03000
]
GCM125_11890
03036 Chromosome and associated proteins [BR:
psek03036
]
GCM125_11890
Transcription factors [BR:
psek03000
]
Prokaryotic type
Helix-turn-helix
LysR family
GCM125_11890
Chromosome and associated proteins [BR:
psek03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
GCM125_11890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
P22_Cro
HTH_AsnC-type
HTH_28
HTH_23
HTH_20
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BDZ41890
LinkDB
All DBs
Position
1219195..1220214
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AA seq
339 aa
AA seq
DB search
MSDAAAPHPGPVRDWDLAQLRALAAAADLGTLDAAARALHVTPSAVSQRIKALEHATGAV
LLRRERPVRPTAAGEALVLLARQIDALTSDASRGLGAAGLPTVRIAVNGDSLATWVLPAL
AALAATASVRISREDQDRSAELLRDGEVMAAITSQARSVQGCTVEPLGVMRYRPMASPGF
RDRWFSSGGPRADALSAAPVVVFDADDRLQDRYLTTHGVDPHDPPRHLVPASAEFVTAVR
LGYGWGMLPDLQVTDDVAAGRVVPIDEGPTQGRPTSRCSGSSGRCAPRPSTPQLRRCAPG
LAARSSPGVTGPAVTCHRAPACYVRPMPRSHAAVPGRSR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgccgccgccccacaccccggcccagtccgcgactgggacctcgctcagctc
cgagcacttgccgccgccgccgacctcggcaccctcgacgcggccgctcgggcgctgcac
gtgacgccctcggcggtgagccagcggatcaaggcgctcgagcacgccacgggcgccgtg
ctgctgcgacgggagcgacccgtccgcccgacggcggcgggcgaggccctcgtgctgctg
gcccggcagatcgacgcgctcacctcggacgcgtcgcgcgggctgggcgctgcgggcctg
ccgaccgtgcgcatcgccgtcaacggggactcgctcgcgacctgggtgctgccggcgctc
gccgcgctcgccgccaccgcctcggtccggatctcccgcgaggaccaggaccggtcggcc
gagctgctccgcgacggcgaggtcatggcggcgatcacgtcgcaggcgaggtccgtccag
gggtgcaccgtcgagccgctcggggtcatgcgctaccggccgatggcgtcgcccggcttc
cgtgaccgctggttctcgagcggcgggccgcgcgccgacgcgctgtccgccgcaccggtc
gtcgtgttcgacgccgacgaccggctgcaggaccgctacctcacgacgcacggcgtcgac
ccgcacgacccgccccgtcacctcgtcccggcgtccgcggagttcgtcaccgccgtccgg
ctcggctacgggtggggcatgctgcccgacctccaggtgaccgacgacgtcgccgccggc
cgagtcgtcccgatcgacgagggccccacccaggggaggccgacgtcccgctgttctggc
agcagtggtcgctgcgcaccccgaccctcgacgccgcagctcaggcggtgcgcgccgggg
ctcgcggcgcgctcctcccccggggtcacggggccggctgtgacgtgccaccgcgccccc
gcctgctacgttcgcccgatgccgaggtcgcacgccgcagtcccgggacgctcccgatga
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