Paraoerskovia sediminicola: GCM125_12420
Help
Entry
GCM125_12420 CDS
T09128
Symbol
lacZ_1
Name
(GenBank) beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00052
Galactose metabolism
psek00511
Other glycan degradation
psek00600
Sphingolipid metabolism
psek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
GCM125_12420 (lacZ_1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
GCM125_12420 (lacZ_1)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
GCM125_12420 (lacZ_1)
Enzymes [BR:
psek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
GCM125_12420 (lacZ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2_N2
Glyco_hydro_2
BetaGal_gal-bd
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
BDZ41943
LinkDB
All DBs
Position
1274756..1277806
Genome browser
AA seq
1016 aa
AA seq
DB search
MSAADRTWESFTPSTGSTSTPRAHLRTDARTLDLDGAWGFRLSPRADAPTEFVDPAFDTT
AWDTVQVPHHWVLDADGRYGTPIYTNIQLPIPLDPPFVPDENPTGDYRTTFTLGGWDAER
TLLRFDGVESHLTVWVNGERVGTSTGSRLVREFDVGPLLHDGENTLAVRVCQWSAGTYLE
DQDQWWLPGIFRSVALIARPVGAVDDVWVRAGYDHLTGEGRLEIEVEAAPEAFPVVVRLP
ELDREVTVERAGITVSAVPDVEPWSAEQPRLYAVEVQSTGERLSLRTGFRTVSIEGDRLL
VNGTPVTFRGVNRHEYHPDQGRVVDLDAVRTDLLLMKRSNIDAVRTSHYPPHPQILDLFD
ELGFWVIDECDLETHAFFFVDWVGNPSDDPRWRDAYLDRIERTVERDKNHPSVILWSLGN
ESGTGQNLAAMAAWVRERDPGRPVHYEGDYTCAYTDVYSRMYPTPVELDIIGAEEGEIFA
CSPAEAARVRSKPMLLCEYGAALGTGPGGLTDYDERFSAHGRIHGGFIWEWRDHGLRSTA
PDGSSYFAYGGDFGEAVHDGNFVMDGLVLSDGAPTAGLAEFAAVSAPLRVLVPGSSDAGH
VVVENRSHSSTSDEFALHVAVAGPEGEMHAESVALPTISPGATATVEVPDAVGHLLDEAS
RRGDDAWATWTVARREASAWAPAGHVVSRTQVVTPQAAPGTATRRRPAVTSRAAAPSSEA
LTFDDAVFDARTGRLESLFGLPVDGPELELWRAPTDNDVGQGAGSFELGYPESTRGFGAP
GPSAAERWRKRGLHRLRRRVESVSADGDSVLVRVTVAAADKAPTLAVTHRWTGLGRTDGG
GPITLRTEVSPSRGWDCTWPRVGVHLALPSGLEDVSWVGAGPGESYPDLAEGAWIGHHSA
HLDALVTPHARPQESGHRSDVRSLDLRDGAGSGLRIRTVPGPGGHRAGFTYSRHSVHETT
AAEHPYELPESRVNHLYLDDAVHGVGSRACGIDPQPRHALWPGARSFRVTFEALDA
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccgcagaccggacctgggagtccttcacaccgtccaccggcagcacgtcgaca
ccgcgcgcgcacctgcgcaccgacgcgcgcaccctcgacctcgacggcgcgtgggggttt
cgtctctcgccgcgagccgacgcccccaccgagttcgtcgaccccgcgttcgatacgacc
gcgtgggacaccgtccaggtgccgcaccactgggtcctcgacgccgacggtcggtacggg
acgccgatctacacgaacatccagctgccgatcccgctggatccgccgttcgtcccggac
gagaacccgacgggcgactaccgcaccacgttcactcttggcggatgggacgccgaacgc
accctgctgcggttcgacggggtggagtcgcacctgacggtgtgggtcaacggggaacgt
gtcggcacgagcaccggcagtcgtctcgttcgcgagttcgacgtcggcccgctcctgcac
gacggcgagaacaccctcgccgtgcgggtgtgccaatggtcggcggggacgtatctcgaa
gaccaggatcagtggtggctccccgggatcttccggtccgtcgcgctcatcgcgcggccc
gtcggggccgtcgacgacgtctgggtccgggccgggtacgaccacctgaccggcgagggc
cggctcgagatcgaggtggaggcggcgcccgaggcgttccccgtcgtcgtccgcctcccc
gagctggatcgcgaggtgacggtcgagcgggcagggatcacggtgtcggccgtgcccgac
gtcgagccctggtccgccgagcagccacggctctacgccgtcgaggtgcagagcaccggc
gaacgactgtcgctgcgcacgggcttccgcacggtgtccatcgagggtgatcggctgctc
gtcaacggcaccccggtcacgttccgcggggtcaaccggcacgagtaccacccggaccag
ggccgcgtcgtcgatctcgacgccgtccgcaccgacctgctgctcatgaagcgcagcaac
atcgacgcggtgcgcaccagccactacccgccgcacccgcagatcctggacctcttcgac
gagctcgggttctgggtgatcgacgagtgcgacctcgagacgcacgccttcttcttcgtc
gactgggtcggcaacccgagcgacgatccgcgctggcgcgacgcgtacctcgaccgcatc
gagcggaccgtcgagcgggacaagaaccatccctccgtcatcctctggtccctcggcaac
gagtccgggaccggccagaacctcgccgcgatggccgcgtgggtccgagagcgggacccg
ggccgcccggtccactacgagggcgactacacctgcgcctacacggacgtgtactcgcgg
atgtacccgacccccgtcgagctcgacatcatcggggccgaggagggcgagatcttcgcg
tgcagcccggccgaggcggcgcgcgtgcggtccaagccgatgctcctgtgcgagtacggc
gcggcgctcggcaccggccctggcgggctcaccgactatgacgagcgcttctccgcgcac
ggccggatccacggcggcttcatctgggagtggcgagaccacggtctgcgcagcactgcc
ccggacgggtcctcctacttcgcgtacggcggcgacttcggggaggccgtccacgacggc
aacttcgtgatggacggcctcgtgctgtccgacggcgcacccacggcagggctcgcggag
ttcgccgcggtcagcgcgccccttcgcgtcctggtgcccggctcgagcgacgccggccac
gtcgtcgtggagaaccgctcgcacagctccacgtcggacgagttcgcgctccatgtcgcg
gtcgcgggaccggagggcgagatgcacgccgagtccgtcgccctgcccactatctcgccg
ggtgccaccgcgactgtcgaggtgccggacgccgtcgggcaccttctcgatgaggcgagt
cgccggggtgacgacgcctgggcgacctggacggtggcccggcgggaggcgagcgcctgg
gctccggccggccacgtcgtgtcgcggacgcaggtcgtgactccacaggccgcgcccggt
accgccacccgccgtcgtcccgcggtgacgtcgcgagcggcagcgccgtcgtccgaggct
ctgacgttcgacgacgcggtcttcgatgcccggaccgggcggctggaatccctgttcggg
ctcccggtcgacgggcctgagctcgagctctggcgtgcgcccaccgacaacgacgtgggc
cagggcgccgggtccttcgagctcggttacccggagtccacgcgcgggttcggcgcaccg
gggccgtccgcggcggagcgctggcgcaagcgcgggctgcaccggctgcggcggcgcgtg
gagtcggtctcggccgacggtgactcggtgctggtcagagtcaccgtcgctgccgcggac
aaggcgccgacgctcgccgtgacccaccggtggaccgggctcggtcgcacggacggcggc
ggcccgatcaccctgcgcaccgaggtgtcgccctcacgcggctgggactgcacgtggccc
agggtcggcgtgcacctcgcactgccctccggcctggaggacgtctcgtgggtgggcgcg
gggcccggtgagtcctaccccgacctcgccgagggtgcgtggatcggtcaccactccgcc
cacctcgacgctctcgtgacgccgcacgccaggccgcaggaatcgggacaccggtccgac
gtccgatcgctcgatctgcgtgacggggccggctcggggctgcggatccgcaccgtgccg
ggacccggtgggcaccgcgcgggcttcacgtactcgcggcactcggtccacgagaccacg
gccgccgagcacccgtacgagctgcccgagtcccgggtcaaccacctctatctggacgac
gcggtgcacggggtgggttcgcgcgcctgcgggatcgacccgcagccgcggcatgcgttg
tggccgggggcgcgctcgttcagggtgacgttcgaggcgctcgacgcgtag
DBGET
integrated database retrieval system
