Paraoerskovia sediminicola: GCM125_13050
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Entry
GCM125_13050 CDS
T09128
Name
(GenBank) D-ribose ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
psek
Paraoerskovia sediminicola
Pathway
psek02010
ABC transporters
psek02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
GCM125_13050
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
GCM125_13050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psek02000
]
GCM125_13050
Transporters [BR:
psek02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
GCM125_13050
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_3
Peripla_BP_1
Motif
Other DBs
NCBI-ProteinID:
BDZ42006
LinkDB
All DBs
Position
complement(1342937..1344085)
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AA seq
382 aa
AA seq
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MQIPSPVTGTDRNRGKTMKFTSRPAAALIGVAIAATTLSACTEEAVGSDDTAAAGGGDAS
TCEPADVTLVGQVRNESNPYEASWLDGGDAFAEQVGLTQERLTYDGDSTRQQEQISQLFA
GDTSCLVMNILPNGDSDTPPIVEGAQDAGAYLVTQWNKPADLAVTDYDSWLSHITYNGVE
SGKQIGDALAEAIGGSGGIVALQGILDTGAAKDRFAGLEESLSANSDVELLDDQTANFSR
AEALEVTKTLLTKHGDDIKGIWAANDDMALGALEALKQAGRTDVAVVGIDAVPDALTAIE
DGEMTATVSSDGPWQGGIGLAIGYCVATGELAVEDIADEDRAWYAEQFLIEKDNVGDFVS
PETDESDFACDNVFSRSQGPIS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcccatcgccggtcaccggcaccgacagaaatcgaggaaagacgatgaagttc
acctctcgacctgcagcagcgctcatcggggtcgcgatcgcggccaccacactctccgcc
tgcaccgaggaggccgtgggcagcgacgacacggcagccgcgggcggcggcgacgccagc
acctgcgaacccgcggacgtcaccctggtgggccaggtgcgcaacgagtccaacccctac
gaggcctcgtggctcgacggcggcgacgcgttcgccgagcaggtcggcctcacgcaggag
cggctcacctacgacggggactcgacgcgccagcaggagcagatcagccagctgttcgcg
ggcgacacctcgtgcctcgtcatgaacatcctgcccaacggcgactcggacacgccgccg
atcgtggagggggcgcaggacgcgggcgcgtacctcgtcacccagtggaacaagccggcg
gacctcgcggtcaccgactacgactcgtggctgtcccacatcacgtacaacggcgtggag
tccggcaagcagatcggcgacgcgctcgccgaggcgatcggtggctccggcgggatcgtc
gccctccagggcatcctcgacaccggcgccgccaaggaccgcttcgccggtctcgaggag
tcgctctcagcgaactccgacgtcgagctgctcgacgaccagacggcgaacttctcgcgg
gccgaggcgctcgaggtgaccaagaccctgctcaccaagcacggtgacgacatcaagggc
atctgggccgccaacgacgacatggcgctcggtgcgctcgaggcgctcaagcaggccggt
cgcacggacgtcgccgtggtcggcatcgacgccgtcccggacgccctcaccgcgatcgag
gacggggagatgaccgcgacggtctccagcgacggtccgtggcagggcggtatcggcctg
gccatcggctactgcgtcgccacgggcgagctcgccgtcgaggacatcgccgacgaggac
cgcgcctggtacgccgagcagttcctcatcgagaaggacaacgtcggcgacttcgtctcg
ccggagaccgacgagtccgacttcgcctgcgacaacgtcttcagccggtcgcagggcccg
atctcgtga
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