Paraoerskovia sediminicola: GCM125_13570
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Entry
GCM125_13570 CDS
T09128
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00470
D-Amino acid metabolism
psek00550
Peptidoglycan biosynthesis
psek01100
Metabolic pathways
psek01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GCM125_13570 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GCM125_13570 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GCM125_13570 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psek01011
]
GCM125_13570 (ddlA)
Enzymes [BR:
psek01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GCM125_13570 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psek01011
]
Precursor biosynthesis
Amino acid ligase
GCM125_13570 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp
ATP-grasp_4
CPSase_L_D2
TTL
DUF4175
Motif
Other DBs
NCBI-ProteinID:
BDZ42058
UniProt:
A0ABN6XAW1
LinkDB
All DBs
Position
1407026..1408150
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AA seq
374 aa
AA seq
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MQSSPSARETGAAGTADGATTDTPDNTTPGTPNSSASSADPAGSTAAASSSSPEAADLQG
CHVVVLAGGMSHERDVSIRSGRRVAESLRTCGAQVTVRDVDAQLLPFLSEHRPDVVWPLL
HGAGGEDGSLRDVLDLLGLCYVGTGPHASRSTWNKAIAKRVAGQAGLSTPDHVTLPQSLF
RDLGARAVLAGVVERLGFPLIVKPNEGGSALGVSWVADAAALPRAMVECFAYGDVALIER
AVTGTEIGVSVIDDGSGPRALPAVEVTTDGPYDYDARYNPGRTEYFAPARLSNELASRAA
EAAITAHTSLGLRHVSRTDMIIDSDGVPQFLEVNVVPGTTETSLLPQAIRASGRSLADVY
GSLVNAALTSANAR
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcagagctcccccagtgcacgtgagaccggcgcggccgggaccgcggacggcgcgacg
accgacactccggacaacacgacgcccggcactccgaacagctcggcgagcagcgcagac
cctgctgggtcgactgcggccgcgtcgtcgtcctcgccggaggcggcagacctccaggga
tgtcacgtcgtcgtcctcgccggcggcatgtcccacgaacgcgacgtctcgatccggtcc
gggagacgtgtcgccgagtccctgcgcacctgtggtgcgcaggtgaccgtccgggacgtc
gacgcgcagctcttgccgttcctctccgagcaccggccggacgtcgtctggcccctcctc
cacggagccggcggggaggacgggtcactccgcgacgtcctcgacctgctcggtctctgc
tatgtcggtacaggcccccacgccagtcgttccacgtggaacaaagcgatcgccaagcgg
gtcgccggccaggccggtctttccacccccgaccacgtcacgctcccgcagtcgctcttc
cgggatctcggtgcgcgcgcagtcctcgccggtgtcgtcgagcggctcgggttccccctg
atcgtcaagcccaacgagggcgggtccgcccttggcgtctcctgggtggccgacgccgct
gcgctcccccgagcgatggtcgagtgcttcgcctacggcgatgtcgctctcatcgagcgc
gccgtgacggggaccgagatcggcgtcagcgtcatcgacgacggatcggggccccgggct
cttcctgctgtcgaagtcaccacggacgggccgtacgactacgacgcacggtacaacccc
gggcggaccgagtacttcgcgcccgcgcggttgtcgaacgagctcgcctcgcgtgccgcg
gaggcagccatcaccgctcacacatctctcggacttcgtcacgtgtcgcgcaccgacatg
atcatcgactcggacggcgttccccagttcctcgaggtcaacgtcgtgccgggcacgacg
gagacatctctcctgccccaggcgatccgtgcgtcgggcagatcgctggcggacgtctac
ggatcactcgtcaatgcggctctgaccagcgcaaacgctcggtag
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