Paraoerskovia sediminicola: GCM125_13720
Help
Entry
GCM125_13720 CDS
T09128
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
psek
Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psek03032
]
GCM125_13720 (gyrA)
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_13720 (gyrA)
Enzymes [BR:
psek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GCM125_13720 (gyrA)
DNA replication proteins [BR:
psek03032
]
Prokaryotic type
DNA Topoisomerases
GCM125_13720 (gyrA)
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GCM125_13720 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BDZ42073
LinkDB
All DBs
Position
1423436..1426093
Genome browser
AA seq
885 aa
AA seq
DB search
MSDETPPQGPDDTTADGTPVPTGEAAVEAAAALAVQHGRVEPVDLQLEMQRSYLDYAMSV
IVGRALPEVRDGLKPVHRRVLYAMYDGGYRPDRSYSKCSRVVGDVMGKFHPHGDSAIYDA
LVRLVQDWSMRYPLVAGQGNFGSPGNDPAAAPRYTECRMAPLAMEMVRDIDKDTVDFGDN
YDGRTQEPLILPSRFPNLLVNGSAGIAVGMATNIPPHNLREVAEGVRWHLAHPEASREDL
LEALLQRIKGPDFPTGATILGHKGIEEAYRTGRGSITMRAVVNVEEIQNRICLVITELPY
QVNPDNLALKIADLVKDGRMQGIADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKHTQ
LQDNFGANMLALVDGVPRTLSLDAFIRHWTTHQIDVVVRRTAYLLREAEKSIHIFRGYLK
ALDALDEVIALIRRSPDADQARTGLMDLLAIDELQATAILNMQLRRLAALQRQQIIDEHD
KLAREIAEYQEILASPQRQRQIVGDEMDEIVSRYGDERRTTILPYDGDVSMEDLIAEEEV
VVTITRGGYVKRTRSDAYRAQRRGGKGVRGANLREDDLVDQFFVTTTHHWLLFFTNLGRV
YRAKAYELPEGGRDAKGQHVANLLAFQPDEHIAQVLSMRDYDAADYLVLATRRGLVKKTR
LEEYNSPRTGGLIAINLRTDDDGVIDELVSARLVDADDDMILVSRKGQSIRFHADDDAMR
PLGRSTSGVTGMKFRDDDELLSADVVVPGSHLFVVTEGGFAKRTDIDEYRVQGRGGLGIK
VANLVEARGNLVAALITEGDDEVLVIMGNGKIVRSAVAEVNLTGRNTQGVTFAKPGKGDR
IIAVARNVERQLAADGDSVSEDEVSAEPSDTAAAADEPAGTTEEA
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgagactcccccgcagggaccggacgacacgacggcggacggcacgcccgtc
cccacgggcgaggctgccgtggaggctgcggcggcgctggccgtccagcacggccgagtc
gagccggtggacctgcagctcgagatgcagcggtcctacctggactacgcgatgagcgtc
atcgtgggtcgcgcgctgccggaggtccgggacgggctcaagccggtgcaccggcgcgtc
ctgtacgcgatgtacgacggcggctaccgccccgaccgctcgtactcgaagtgcagccgc
gtcgtcggcgacgtcatgggaaagttccacccgcacggtgactcggcgatctacgacgcg
ctcgtgcgcctggtgcaggactggtcgatgcgctacccgctcgtcgccggccaggggaac
ttcggctcccccggcaacgaccccgcggcagcgcctcgatacaccgagtgccgcatggcg
ccgctggccatggagatggtccgcgacatcgacaaggacaccgtcgacttcggcgacaac
tacgacggtcgcacccaggaacccctgatcctgccctccaggttcccgaacctgctggtc
aacggctcggcgggcatcgcggtcggcatggccacgaacatcccgccccacaacctgcgc
gaggtcgcggagggcgtccgctggcacctcgcgcacccggaggcgagccgcgaggacctc
ctcgaggcgctgctgcagcgcatcaaggggccggacttcccgacgggcgcgacgatcctc
ggccacaaggggatcgaggaggcgtaccggacgggccgaggctcgatcacgatgcgcgcc
gtggtcaacgtcgaggagatccagaaccggatctgcctcgtcatcaccgagctcccgtac
caggtcaacccggacaacctcgccctgaagatcgccgacctcgtcaaggacgggcggatg
cagggcatcgcggacatccgcgacgagacgtccggtcgcaccggccagcgcctcgtgatc
gtgctcaagcgcgacgccgtcgcgaaggtcgtcctcaacaacctgtacaagcacacgcag
ctccaggacaacttcggcgcgaacatgctcgcgctggtcgacggcgtgccccgcacgctc
agcctggacgcgttcatccggcactggacgacgcaccagatcgacgtcgtcgtgcgccgc
acggcctacctgctgcgcgaggccgagaagtcgatccacatcttccgcggctacctgaag
gctctcgacgccctcgacgaggtcatcgccctgatccgccgctcccccgacgccgaccag
gcgcgcacggggctgatggacctcctcgcgatcgacgagctccaggcgaccgcgatcctc
aacatgcagctccgccggctcgcggcgctccagcgccagcagatcatcgacgagcacgac
aagctcgcccgcgagatcgccgagtaccaggagatcctggcgtcgccgcagcggcagcgc
cagatcgtcggcgacgagatggacgagatcgtctcccggtacggcgacgagcgtcggacg
acgatcctcccctacgacggcgacgtctccatggaggacctcatcgccgaggaggaggtc
gtcgtcacgatcacccgtggtgggtacgtcaagcgcacccgcagcgacgcctacagagcg
cagcggcgcggcggtaagggtgtccgtggcgcgaacctgcgcgaggacgacctcgtggac
cagttcttcgtcaccacgacgcaccactggctgctgttcttcacgaacctcggtcgcgta
taccgggcgaaggcgtacgagctccccgagggtggccgcgacgcgaaggggcagcacgtc
gcgaacctgctcgcgttccagccggacgagcacatcgcccaggtcctgagcatgcgcgac
tacgacgcggccgactacctggtcctggccacgcgccgtggtctcgtgaagaagacgcgg
ctcgaggagtacaactccccgcgtaccggcggtctcatcgccatcaacctgcgcacggac
gacgacggcgtgatcgacgagctcgtctccgcgcgcctcgtggacgcggacgacgacatg
atcctcgtctcgcgcaagggtcagtccatcaggttccacgccgacgacgacgcgatgcgg
ccgctcggccgatcgacctccggcgtcaccggcatgaagttccgggacgacgacgagctg
ctctcggcggacgtcgtggtgccgggctctcacctgttcgtggtcaccgagggcggtttt
gcgaagcgcaccgacatcgacgagtaccgcgtccaaggacgtggtggcctcgggatcaag
gtggccaacctcgtggaggcccgcgggaacctggtcgcggcactgatcacggagggcgac
gacgaggtcctcgtgatcatgggcaacggcaagatcgtcaggtctgccgtcgcggaggtg
aacctcaccgggcgtaacacccagggcgtcacgttcgccaagcccggcaagggcgaccgg
atcatcgccgtcgcccggaacgtcgaacgtcagctcgcggcggatggcgatagcgtgagc
gaggatgaggtgagcgccgagccgagcgacaccgcagcggcggcggacgagcccgccggg
acgaccgaggaggcgtag
DBGET
integrated database retrieval system
