Paraoerskovia sediminicola: GCM125_15180
Help
Entry
GCM125_15180 CDS
T09128
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psek
Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_15180 (sbcD)
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM125_15180 (sbcD)
Archaeal homologous recombinant proteins
GCM125_15180 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
BDZ42219
LinkDB
All DBs
Position
1585179..1586402
Genome browser
AA seq
407 aa
AA seq
DB search
MRILHTSDWHLGRTLHGVDLLEHQRVFLEHLVATVRERSVDAVLVAGDVYDRAIPSVEAV
ESLGTALRRLAELTTVVLTPGNHDSATRLGFAAPLLRDELHILSSSDVGRPVEIQGRHGE
APLHVYGFPYLEPESFRSVLADDPQKPLLRSHAAVTAAAMRRVRADRLARECRALSGEGP
ARAVVMAHAFVVGGQASDSERDIRVGGVDSVPAGVFAGCGVDYVALGHLHGPQKVTVPEA
ASPEALPGPPPSARYSGSPLAYSFSEMNHTKSTVLLDLDAPDDQRIELVPAPVPRRMADL
SGTFEEVMGARGEAHTGDWLRLTVTDPQRPDELVARVRSRFPHALQIRHEPASRDARETV
RVVERGADPLVVVRDFVTHVTGAAPTPEESGVLAQAHEAVLAAEKSA
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatcctgcacacctccgactggcacctggggcgcacgctgcacggcgtcgatctc
ctcgagcaccagcgcgtgttcctcgagcacctcgtggcgacggtgcgggagcgctcggtg
gacgccgttctcgtcgcgggtgacgtctacgaccgagccatcccgtccgtcgaggccgtc
gagagcctggggacggcgctgcgccggctggccgagctgaccacggtcgtcctcaccccg
ggcaaccacgactcggcgacgcgtctcggattcgcagctcccctcctgcgcgacgagctc
cacatcctgagctcgtccgacgtcggtaggcccgtcgagatccagggccgccacggcgag
gcaccgctgcacgtctacgggttcccctacctggagcccgagagcttccgttcggtgctg
gccgacgacccgcagaagccgctcctgcgctcgcacgccgcggtgaccgcggccgcgatg
cggcgggtccgtgccgaccggctcgcccgcgagtgccgtgcgctctccggcgaggggccc
gcacgcgctgtcgtcatggcgcacgcgttcgtcgttggcgggcaggcgtccgactccgag
cgtgacatccgggtcgggggcgtcgactcggtgccggccggggtgttcgcggggtgcggc
gtggactacgtcgcgctcggtcacctccacggacctcagaaggtgacggtgccggaggcc
gcgtcgcccgaggcactcccgggcccgcccccgtcggctcgctactcgggttctccgctc
gcgtactcgttctccgagatgaaccacacgaagtcgacggtgctgctcgacctcgacgca
ccggacgatcagcgcatcgagctcgtcccggccccggtgccgcgccgcatggccgacctg
tcgggcaccttcgaggaggtcatgggagcgcgcggggaagcgcacaccggcgactggctt
cgcctcaccgtgacggacccccagcgaccggacgagctcgtggctcgggtgcggtccagg
ttcccgcacgcgctgcagatccgacacgagcccgcgtcacgggacgcccgcgagacggtc
cgtgtcgtcgagcgcggcgccgacccgctcgtcgtggtccgggacttcgtcacccacgtc
accggtgcagcaccgacccccgaggagtccggcgtccttgcgcaggcccacgaggcggtc
ctcgctgcggagaagagcgcctga
DBGET
integrated database retrieval system
