Paraoerskovia sediminicola: GCM125_15270
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Entry
GCM125_15270 CDS
T09128
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GCM125_15270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_15270
Enzymes [BR:
psek01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GCM125_15270
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GCM125_15270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDZ42228
LinkDB
All DBs
Position
complement(1596255..1597019)
Genome browser
AA seq
254 aa
AA seq
DB search
MGLMGRVGPGRPEGAPERATASPTVDALDALVTTCRACPRLVAWREQVAAEKRAAFRDET
YWGRPVPGFGDPGAGVLVVGLAPAAHGANRTGRMFTGDRSGDFLFAALHRTGFASQPGST
TSDDGMVLTGVRLTAPVRCAPPANRPTPAERHACGPFLARELDLVDPAVVVILGGFGWQA
TLATLAERGWQVPRPRPVFGHGAEVVLRRVDDAEPRTITLLGCFHVSQQNTFTGRLTPEM
LDDVLVRARELAAP
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
gtggggctgatgggtcgagtagggccagggcggcccgagggcgcccccgagcgcgcgacc
gcgtcgcccacggtcgacgcgctcgacgccctcgtcaccacctgccgcgcgtgcccccgg
ctggtcgcgtggcgggagcaggtcgctgccgagaagcgggcggcgttccgggacgagacc
tactggggcaggccagtcccggggttcggggaccccggggcgggcgtcctggtcgtcggt
ctggcgcccgcggcgcacggggccaaccgcacgggccgcatgttcaccggggaccggtcc
ggcgacttcctcttcgcggcgctccaccggacgggtttcgcgtcccagcccgggtccacg
acgtcggacgacggcatggtcctcacgggcgtccggctcacggccccggtgcgctgcgcc
ccgcccgcgaaccgccccaccccggccgagcggcacgcctgcgggccgttcctcgctcgg
gagctcgacctcgtcgaccccgcggtggtggtcatcctcggcgggttcgggtggcaggcg
acgctcgcgacgctcgccgagcgcgggtggcaggtaccccggccccggccggtgttcggg
cacggtgcggaggtggtgctccgacgcgtggacgacgccgagccgcgcacgatcaccctc
ctcgggtgcttccacgtctcgcagcagaacacgttcaccggccgcctgacgccggagatg
ctggacgacgtcctcgtccgggcgagggagctcgccgccccgtag
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