Paraoerskovia sediminicola: GCM125_16460
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Entry
GCM125_16460 CDS
T09128
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM125_16460 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psek01007
]
GCM125_16460 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psek03016
]
GCM125_16460 (serS)
Enzymes [BR:
psek01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
GCM125_16460 (serS)
Amino acid related enzymes [BR:
psek01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
GCM125_16460 (serS)
Transfer RNA biogenesis [BR:
psek03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
GCM125_16460 (serS)
Prokaryotic type
GCM125_16460 (serS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF5799
LPP
Herpes_BLRF2
Motif
Other DBs
NCBI-ProteinID:
BDZ42347
LinkDB
All DBs
Position
1723711..1724991
Genome browser
AA seq
426 aa
AA seq
DB search
MIDLKRMRDEPDVVRASQVARGDDPDLVDAALSADTLRRSLLNEFEQLRAEQKAMGKQVA
QAQGDEKQELLARTKQLAGEVKARQADAEAAEAELTRLLRSIDNVVEGAPPGGEDDFVVL
RTEGTIRDFAAEGFEPRDHLALGEGIAGIDTERGAKVSGARFYYLTGIGARLELAIMNAA
MDQAIEAGFTPVMTPTLVRPEIMQGTGFLGAHSDEVYHLKSDDLYLVGTSEVALAGYHHG
EIMDLSAGPKRYAGWSACYRREAGSYGKDTRGIIRVHQFHKVEMFSWCAPEDAEAEHQRL
LAWEEQMLARCELPYRVIDTAAGDLGSSAARKFDCEAWLPTQNRYLELTSTSNCTTYQAR
RLNVRERTEEDGRTGTRTIATLNGTLGTTRWIVAILENHQQADGSVRVPEGLRPYLGGLE
VIEPVA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacctcaagaggatgcgcgacgagccagacgtggtccgggccagccaggtggcc
cgcggcgacgaccccgacctggtggacgcggcgctctctgccgacaccctgcgccgctcc
ctgctgaacgagttcgagcagctgcgggccgagcagaaggcgatgggcaagcaggtcgcc
caggcccagggcgacgagaagcaggagctgctcgcgcggaccaagcagctcgccggcgag
gtcaaggcccgccaggcggacgccgaggccgcggaggccgagctcacgcgcctgctccgg
tcgatcgacaacgtcgtcgagggcgcgcccccgggcggcgaggacgacttcgtggtgctc
cgcaccgagggcacgatccgcgacttcgccgccgagggcttcgagccgcgtgatcacctg
gcgctgggcgagggcatcgccgggatcgacactgagcgtggcgcgaaggtctcgggggcc
cggttctactacttgacgggcatcggcgcgcgcctcgagctcgccatcatgaacgcggcg
atggaccaggcgatcgaggccggcttcacaccggtcatgacgccgaccctggtgcgcccc
gagatcatgcaggggaccgggttcctcggtgcgcactcggacgaggtctaccacctcaag
tccgacgacctgtacctcgtgggcaccagcgaggtcgctctcgcgggctaccaccacggc
gagatcatggacctctcggccggccccaagcgctacgccgggtggagcgcttgctaccgg
cgcgaggccggctcctacggcaaggacacccgcggcatcatccgcgtgcaccagttccac
aaggtcgagatgttcagctggtgcgcacccgaggacgccgaggcggagcaccagcggctg
ctggcgtgggaggagcagatgctcgcgcggtgcgagctgccctaccgcgtcatcgacacg
gcggccggtgacctcgggtcgagcgccgcccgcaagttcgactgcgaggcgtggctcccc
acccagaaccgctacctcgagctcacgtcgacctcgaactgcacgacgtaccaggcgcgt
cgtctcaacgtgcgcgagcgcacggaggaggacggcaggacgggcacgcgcacgatcgcg
acgctcaacgggacgctgggcaccacccgctggatcgtcgcgatcctcgagaaccaccag
caggccgacgggtcggtgcgggtccccgagggcctgcgcccgtacctgggcggcctcgag
gtcatcgagcccgtcgcgtga
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