Paraoerskovia sediminicola: GCM125_17690
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Entry
GCM125_17690 CDS
T09128
Name
(GenBank) hypothetical protein
Organism
psek
Paraoerskovia sediminicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF11
zf-HC2
Sigma70_r4_2
PilZ
Motif
Other DBs
NCBI-ProteinID:
BDZ42470
LinkDB
All DBs
Position
1853734..1859484
Genome browser
AA seq
1916 aa
AA seq
DB search
MASTEEPTLEGFERTTVARAYEGLPERWRSVLWYAEVENMTPAQIAPMLGLTANGVAALA
YRAREGLRQAYLQQHLSSAVSAECERANGLLGSYVRGGLAKRETAVVESHLEDCSECRAL
VLELGDVSQGMRGIVAPLVLGLGAIGLVGAGFPIGGAAVGAAAAGGSGSAGSGTGAAGSG
SAGSGAAAGSAGTAGSTGAVGAGAGAAGTATAGAAAGAAGTAGVAGLVGAGSAVGAAGGF
AAMIAAAPFAAALIAVGALAVVGVGVVVGINALSDDDAPGQQVASGSQEAGQDDAGGAGG
TDGSGSTDGADGTMGGATDDATSDSGSDDATSDAGDTPTSDADGAVTGSGAVDDPTSPTN
IPPALASGPTAEQPAGTAGSGAGSTDGTSSAGGTGGTDGTDVPAPPVVVPPVVVPPTPAS
LDLQIDDSITLEARQAQNLVVSAVNSGGTSASGVSVEVVLPPGVDSPSSAAISGGTSVPG
TLSMAEVPCGRPDSDDLTVARTVTCALGTIGPGDSAGVSVRVRADSGGEYAFAARAWGTG
IDRVERRFAPTRVAYWGGEVAVALDAPGGTLGNPGSATATLKLRNSGDRAVDDAAVTLAV
PAGLELVSAGGDWDCDSGSGAVDCSTSGELGRGEVRSGTLRLVSAIDESGDTATPTGDVV
VHAAARAVQATGSRAGQTVTDSDDRSFRFAEPWGGTGSGSGVVAPCVPESDGEPASSAVA
LDGPLRNASMLPLTATLVGSTLEDSATALIAAGESAELSIDTGILRAAGDASLELRQSVG
SRTYTRVLDGIGEYSACDLRPQVDVQATEGLELAAREASMLELAVSNAGGTSAVAVETEV
VIPAGVNTPSSAMVSGGASVAGALTVAEVQCGRASSDDVTVARTVTCAAGTIEPGETTEL
SVPVTAASGGEYVFASSTSGTGFPTVERQFRATASYWGADLGLVLDGPGSVVANPGTADV
AMTLANRGDRAAGEVDVEVTVPDGFGLYGADGDWSCEPGDGTVECASDGIGVGKSRTGTL
HLVTLGDGRDGASGDTLAAGGAAEISADAVATEVSPAGPEVDARDSVSFDVEDAWGAVGE
VQAQSVCLLDAEPGAVRSAIALGVPGAEGSLTNSSVAPYEATLIGSGPEQRASATLDEGQ
SADLTIDTGLGHAAGDARLELRRDVRVGDATRSFLRDIEAGSFEACDAFAPDVETPEFSA
ELRDVDGEKIVVLGATFANTTEADLQVWFGDTSSATVVAAGEKVSLERTTDSATYEGTPE
IGYRWVDDAAHGGDHGTDHTITAAEALHAAYAPEATVEPGACTWDPATGASGTEVTITLD
NSASTFPAEFEYSIGSGDVESVDVPAGSGAGSDPEASVVVVHLTAGAAGATLSVSADGTR
LAVEEIPEASCVPWITDVATPTVQCSDDGFVVVTGTLENDGAARIRALALTNVRLSPGAD
PTHYQQAVDLDPGATGTYRLVTGARSLDAGQTVVVGQTVLPFSLGLKLPGDDRPKADTTE
GIDCMPWITADAIPAPTLECTADGYAVIVGSVENASGVPMRALPFANVWVADKERSVHYQ
QHIKLPVGSGEVGYRLVTDARTVKAGQVVTVDQWFTDGSGTRNPDRPRVSTESGIDCSPA
PSAELVLGPVAFDKSASRTMQDATVRLRNDSADGVTIDLSVTGADLASPVESTLGADESA
DVPVRFGTDGTSVTVTSGEWTTTLEAPAFVAPCLPAWVQSQWWRPVTYAKGSAVSDDGAN
YVATKKSYGVLPPSHDVQVLFAAWTRVEPCRGADAQDAARAPQGEESSEPDAKLEPSEQP
GTGEQPRTREEQKSTNEPAPSSGSARTTPSPTATTEPRTEPTAEGAAQPTSDPTAEPSPT
EGSTTEPSSKRSSSGQAATPDAKATPSQSATPKQSATPDPTASTSRSRDRGAWARD
NT seq
5751 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgacggaggagccgacgctcgagggattcgagcggaccacggtcgcgcgcgcg
tacgagggtctgccggagcgctggcggtccgtcctctggtacgccgaggtcgagaacatg
accccggcgcagatcgcgccgatgctcgggctcaccgcgaacggcgtcgccgcactcgcg
taccgggcccgcgagggtctgcgccaggcgtacctccagcagcacctgagctcggccgta
tcggcggagtgcgagcgcgccaacgggctgctcggctcctacgtcaggggtggcctcgcg
aagcgcgagaccgcagtcgtggagtcccacctggaggactgctcggagtgccgggcgctc
gtgctcgagctcggcgacgtgtcgcagggcatgcgtggcatcgtcgcgccgctggtcctc
gggctcggcgcgatcgggctcgtcggcgccgggttcccgatcggtggcgccgcggtcggc
gctgctgctgcgggtggctcggggagcgcaggctccgggaccggagcggcaggttccggg
tcggccggttccggcgcagctgcggggagcgcgggcacggcgggaagcacgggcgccgtg
ggcgccggagcgggggctgccggcacagcgacagctggcgcggccgccggggcagccgga
actgcgggcgtggcagggctggtcggcgccgggagcgcggtcggcgccgcaggcggcttc
gccgcgatgatcgcggccgccccgttcgcggcggcgctcatcgccgtcggagctctcgcg
gtggtcggcgtcggtgtggtcgtcgggatcaacgccttgtcggacgacgacgcacccggt
cagcaggtcgcgtccggaagccaggaggcgggtcaggacgacgccggcggcgccggtggc
acggacggcagcggcagcacggacggtgctgacgggaccatgggcggggccaccgacgac
gcgacgtccgactcggggtcggacgatgcgacgtccgacgccggcgacacccctacgtcc
gacgcggacggcgccgtgactggctccggagctgtggacgacccgacctcgcccacgaac
atcccaccggccctggccagcggtccgacggccgagcagcccgccgggacggcagggtcc
ggcgcgggctcgaccgatggcacgtcctctgcgggtgggaccggcgggacggacggcacc
gacgtgcccgcgccgcctgtggtggtgcctccggtggtggtcccgccgacgccggcctct
ctcgacctgcagatcgacgactcgatcaccctcgaggcgcgccaggcgcagaatctcgtg
gtgagcgcggtgaactccggcgggacgagcgcgtcgggtgtctccgtggaggtcgtcctc
ccgccgggggtcgactcgccgtcgtccgcggcgatcagcggcgggacgtcggtcccgggg
acgctctcgatggccgaggtgccgtgcggccgcccggactcggacgacctcacggtcgcc
cggacggtgacgtgcgcgctcgggacgatcggtccgggcgactctgcgggcgtgtcggtg
cgggtgcgcgcggactcgggcggcgagtacgcgttcgcggcgcgcgcgtggggcacgggc
atcgatcgggtcgagcgtcggttcgccccgacccgggtcgcgtactggggcggggaggtc
gccgtcgcgctcgatgcgccgggcgggaccctcggcaacccgggttcggccactgccacc
ctgaagctcaggaacagcggggaccgagcggtcgacgacgccgcggtgacgctcgcggtc
ccggcgggcctcgagctggtgtcggccgggggcgactgggactgcgacagcggctcgggg
gccgtggactgctcgacgtccggggagctcggccgcggcgaggtcaggtccgggacgttg
cgcctggtgtcggcgatcgacgagtccggtgacacagcgaccccgacgggtgacgtcgtg
gtgcacgcggcggcgcgcgcggtgcaggcgacggggtcccgcgccggccagacggtcacg
gacagcgacgacaggtcgttcaggttcgcggagccctggggcggtacggggtccgggtcc
ggtgtcgtcgcaccctgcgtccccgagtcggacggcgagcccgcgagctcggccgttgcg
ctcgacggaccgctgcgcaacgcgtcgatgctccctctcacggcgactctcgtgggttcg
accctcgaggacagcgcgacggcgctcatcgccgccggggagagcgcagaactctcgatc
gacaccgggatcctccgcgctgcaggcgacgcgagcctcgagctgcgtcagtcggtgggg
tcgcgcacctacaccagagtcctcgacggcatcggcgagtactcggcctgcgaccttcgc
ccgcaggtcgacgttcaggcgaccgagggcctcgagctcgcggcacgcgaggcctcaatg
ctcgagctcgcggtctcgaacgcgggtgggacctcagcggtagccgtcgagaccgaggtc
gtgatccccgccggcgtaaacactccctcttccgccatggtcagcggcggcgcgtcggtc
gccggcgcgctcaccgtcgccgaggtccagtgcggccgtgcctcgtccgacgacgtcacg
gtcgcccgcacggtgacgtgtgccgccggcacgatcgagcccggcgagaccaccgagctg
tcggtccccgtcaccgcggcctcgggcggcgagtacgtgttcgcctccagcaccagcggc
acggggttcccgacggtcgagcggcagttccgcgccaccgcgagctactggggtgcggac
ctcgggctcgtgctcgacgggcccggctccgtcgtcgcgaaccccggcacggccgacgtc
gcgatgacgctcgcgaaccgtggtgaccgcgctgcgggcgaggtcgacgtcgaggtcacg
gtcccggacgggttcggtctctacggcgcggacggcgattggtcgtgcgagcccggtgac
gggaccgtcgagtgcgcctcggacggcatcggcgtcgggaagtcccgcaccggcacgctg
cacctcgtgacgctcggcgacgggcgtgacggtgcgagcggggacacgctcgcggccggc
ggcgcggcggagatcagcgcagacgcggtggcgaccgaggtgtcccctgcaggccccgag
gtcgacgcgcgcgacagcgtgtccttcgacgtcgaggacgcctggggcgctgtcggcgag
gtgcaggcgcagagcgtgtgcctcctggacgcggagccgggtgccgtgcgctccgccatc
gccctcggcgtgccgggggcggaggggtcgctgacgaattcgtcggtcgcgccctacgag
gccaccctgatcggttccggccccgagcagcgggcgtcggcgaccctcgacgagggccag
agcgcggacctcacgatcgacacggggctcggccacgccgccggcgacgcccggctcgag
ctgcgccgcgacgtccgcgtcggtgacgcgacccggtcgttcctccgggacatcgaggcc
gggtcgttcgaggcgtgcgacgccttcgcgcccgacgtcgagacccccgagttctccgcc
gagctgcgcgacgtcgacggcgagaagatcgtcgtcctgggggcgaccttcgcgaacacc
acggaggccgacctccaggtctggttcggggacacgtcgtccgccaccgtcgtcgccgcc
ggcgagaaggtctcgctcgaacgaacgaccgactcagcgacctatgagggaacgccagag
atcgggtaccgctgggtcgacgacgcggcgcacggcggcgaccacgggacggaccacacg
atcacggccgccgaggcgctccacgccgcgtacgcgccggaggccaccgtcgaacccggc
gcgtgcacctgggaccccgcgaccggcgcgtcgggcaccgaggtcacgatcaccctggac
aactccgcgtcgacgttcccggccgagttcgagtactcgatcggctccggggacgtcgag
tcggtcgacgtcccggccgggtcgggcgccgggagcgacccggaggcgtcggtcgtcgtc
gtgcacctgacggccggggctgccggcgcgacgttgtccgtgagcgcggacggcacgcgg
ctcgcggtcgaggaaatccccgaggcctcgtgcgtcccgtggatcaccgacgtcgcgacg
cccaccgtccagtgcagcgacgacgggttcgtcgtcgtcaccgggacgctcgagaacgac
ggtgccgcccgcatccgggcgctcgccctgaccaacgtgcggctctccccgggggccgac
ccgacgcactaccagcaggccgtggacctcgacccgggggcgaccgggacgtaccggctc
gtgaccggggccaggtcgctcgacgcgggccagacggtcgtcgtcggccagacggtcctg
ccgttcagcctcgggctcaagctccccggagacgaccggcccaaggccgacacgaccgag
ggcatcgactgcatgccgtggatcaccgcggacgcgatcccggccccgacgctcgagtgc
acggccgacgggtacgccgtgatcgtggggtccgtcgagaacgcgtccggcgtgccgatg
cgcgcgctcccgttcgcgaacgtctgggtcgcggacaaggagcgcagcgtccactaccag
cagcacatcaagctccccgtgggttccggggaggtcggctaccggctcgtcacggacgcg
cgcacggtgaaggccggccaagtggtgaccgtcgaccagtggttcacggacgggtccggg
acccgcaaccccgaccggccccgggtcagcaccgagtccggcatcgactgctcaccggcg
ccctcggcggagctcgtgctcggacccgtcgcgttcgacaagagcgcctcgcggaccatg
caggacgccacggtcaggcttcgcaacgacagcgccgacggagtcaccatcgacctttcc
gtgaccggcgccgacctcgcgagccccgtcgagagcacgctgggtgccgacgagtccgcc
gacgtccccgtgcggttcggtaccgacggcacgtcggtcacggtgacgtcgggcgagtgg
acgacgacgctcgaggccccggcgttcgtcgcgccctgcctgccggcgtgggtccagtcg
cagtggtggcgaccggtcacctacgccaaggggtccgcggtgtcggacgacggggcgaac
tacgtggcgacgaagaagtcctacggtgtcctcccgccgtcgcacgacgtccaggtcctg
ttcgccgcgtggacccgggtggagccgtgccggggcgcggacgcgcaggacgcggcgcgt
gcccctcagggcgaggagtcgagcgagccggatgcaaaactcgagccgtcagagcaaccc
ggcacgggcgagcagccgcgcacgcgcgaggagcagaagagcacgaacgagccggcgccg
tcatccggctccgcgaggaccacgccgtccccgacagcgaccacggagcccaggacggag
ccgaccgcggaaggcgcggcgcagccgacctctgatcccaccgccgagccgagcccgacc
gaggggtcgacgaccgagccgtcatcgaagcggtcgtcgtccgggcaggctgccaccccg
gacgccaaggccacgccgtcgcagagcgccaccccgaagcagagcgcgacgccggacccg
acggcgtcgacgtcccgcagccgtgaccggggcgcctgggctcgcgactga
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