Paraoerskovia sediminicola: GCM125_18230
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Entry
GCM125_18230 CDS
T09128
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek03030
DNA replication
psek03430
Mismatch repair
psek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM125_18230
03430 Mismatch repair
GCM125_18230
03440 Homologous recombination
GCM125_18230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psek03032
]
GCM125_18230
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_18230
Enzymes [BR:
psek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM125_18230
DNA replication proteins [BR:
psek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM125_18230
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM125_18230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_14
Rad17
AAA_30
Mg_chelatase
AAA_2
AAA_18
zf-CXXC
AAA_28
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
BDZ42524
LinkDB
All DBs
Position
1910586..1913417
Genome browser
AA seq
943 aa
AA seq
DB search
MSTALYRRYRPDDFSEVIGQQHVTGPLMQALKSERITHAYLFSGPRGCGKTTSARILARC
LNCAQGPTPTPCGECDSCVELARGGSGSLDVVEIDAASHGGVDDARDLRERATFAPTRDR
YKIFILDEAHMVTPSGFNALLKIVEEPPPHIKFIFATTEPDKVIGTIRSRTHHYPFRLVP
PDVLGPYLDELCAAEGVAIGSGVVPLVVRAGGGSVRDSLSVMDQLIAGAEDGTVDYDRAT
ALLGFTHAALLDEVVDAVAAGDGGAMFRVVDRIVSTGHEPRRFVEDLLERLRDLVVIAVS
GDSADAVFRDLPTDQLDRMRTQAQGLGVAELSRAADLVNAALTEMVGATSPRLHLELMCA
RLLVPGGAAGGGLVARVERLERGGAAPADRGVTAGAESAGRAGAGAGPAGVGAGRAEGQD
VGSGAGDRPRVRVADVPEARDHRRRDPAAAARGADAVRAALGRKERAPAAEAEPVPERAA
ASAPASAPVPEPVPAVREPGPAEREPGPAEREPAPEPQTMAPEPERQAATPEPELDNTAA
SAEAEPQAVNPDPEAEDREIATESAVPGPEPQTEAAEPDPEPAPGPEPQTQAAEPDPEPA
PGPEPQPETEPEAPEPDEPSEPSAPHQAAQIVADDLKAALRSGWNRFGQGVSGRAPEVAA
LLGGLSYEFGDNRLVLVFGDHGRLRSFTELDGAAVVAASASEVVGAPVEVEARPDGDLPV
TDGRQGSGAGRRPRPAVQPAVRPAARPAVRPALRPAARPAAPMRAAARSPRPRAARGPAP
RARTARDLVPQRVRQPHRPTRTRRTRRGSQEPRRSSLRSRTTARPKRPAPPHLQGTTHPC
GSAASRAQPPMRRSTAQTRRMCRPPTRPRCRPPCRPARHGSPRRRRPSPTPVATPAPPGR
TRRHRRAGPRWTWCPTTSPTTTPTWPRRAWWASRWSCRCSVER
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaccgccctgtaccgccgctaccggcccgacgacttctccgaggtgatcgggcag
cagcacgtcaccgggccgctgatgcaggcgctgaagtccgagcgcatcacgcacgcctac
ctgttctccgggccgcgcgggtgcggcaagacgacctccgcgcggatcctcgcccggtgc
ctcaactgcgcccagggcccgacgcccacgccctgcggcgagtgcgactcgtgcgtcgag
ctggcccgcggagggtccgggagcctcgacgtcgtcgagatcgacgcggcgtcccacggt
ggcgtggacgacgcccgcgacctgcgcgagcgggccaccttcgctccgacgcgcgaccgc
tacaagatcttcatcctcgacgaggcgcacatggtgacgccgtcggggttcaacgcgctg
ctcaagatcgtcgaggagccgccgccccacatcaagttcatcttcgcgacgaccgagccc
gacaaggtcatcgggacgatccgctcgcgcacccaccactacccgttccggctcgtgccc
ccggacgtgctggggccgtacctcgacgagctctgcgccgccgagggcgtggccatcggg
tccggcgtcgtgccgctcgtcgtgcgggccggcggcgggtcggtgcgcgactccctgtcc
gtgatggaccagctcatcgcgggcgccgaagacggcaccgtcgactacgaccgcgcgacc
gcgctgctcggcttcacccacgcggcgctgctcgacgaggtcgtcgacgcggtcgcggcc
ggggacggcggggcgatgttccgggtcgtcgaccgcatcgtgtcgaccgggcacgagccg
cgacggttcgtcgaggacctgctcgaacgcctgcgcgacctcgtcgtcatcgcggtctcg
ggcgactcggccgacgcggtgttccgcgacctgccgaccgaccagctcgaccgcatgcgg
acccaggcgcaagggctcggcgtggccgagctctcccgcgccgccgacctcgtcaacgct
gcgctcaccgagatggtcggggccacgtccccgcgcctgcacctcgagctgatgtgcgcg
cggctgctcgtgcccggcggggccgccgggggcggtctcgtcgcccgggtcgaacggctc
gaacgcggcggcgcggcgcctgcagatcggggcgtgacggctggtgccgagtccgcgggc
cgcgcgggggccggtgcgggtcctgcgggcgtaggcgccgggcgtgccgagggtcaggac
gtcgggagcggtgcgggtgatcggccgcgagtgcgcgtcgccgacgtcccggaggcccgg
gaccacagacgtcgagaccccgccgcggcggcgcgcggtgccgacgcggtgcgtgcggcg
ctcggacgcaaggagcgcgcgcctgcggcggaggcggagcccgttccggagcgtgcggct
gcgtctgcgcctgcgtctgcccctgttcccgagcctgtcccggccgtgcgcgagcccggc
ccggccgagcgcgagcccggcccggccgagcgcgagcccgcgcccgagcctcagacgatg
gcccccgagccggagcgtcaggcagcgactcccgagccggagctcgacaacacggcggcg
agtgccgaggctgagcctcaggcagtgaaccccgatcctgaggcggaggaccgggagatc
gcgaccgagagcgcggtgccggggcctgagccgcagaccgaggctgccgagccggacccg
gagccagcgccggggcctgagccgcagacccaggctgccgagccggacccggagccagcg
ccggggcctgagccgcagcccgagaccgagcccgaggcgcctgaaccggatgagccctca
gaaccgtcggcaccgcaccaggccgcgcagatcgtcgcggacgacctcaaggccgccctc
cggtcgggctggaaccgcttcgggcagggcgtcagcgggcgcgcgcccgaggtcgcggcg
ctgctcggtggtctgagctacgagttcggcgacaaccgtctcgtcctggtcttcggtgac
cacggccggctgcggtcgttcaccgagctggacggtgctgccgtcgtggccgccagcgcg
tcggaggtcgtcggcgcgcccgtcgaggtcgaggcgcgaccggacggcgacctgccggtc
acggacggccgacagggttcgggggcgggccgtcgtccgaggccagcggtgcagccggcg
gtgcgtccggcagcgcggccggcggtgcgtccggcgctgcgtccggcagcgcggccggcg
gcgccgatgcgcgcggcggcgcgcagtccacgaccgcgggccgctcggggcccggcgcct
cgggcgcgaacggcccgggatctggtccctcagcgggtccgtcagccgcaccggccgacg
aggacgcggcggacgcggcgtggctcgcaggagccacgtcgatcgagcctccgttcgagg
acgacggctcggccgaagcgtccggccccgccacaccttcaggggacgacgcacccgtgc
ggctcggccgcgagccgggcgcagcccccgatgcgtcggtcgacggcgcaaacgcgcagg
atgtgccgcccaccgacccgacctcggtgccgcccaccgtgccggccggcccggcacggc
agtccgcggcggcggcggccatcgcccacgcccgtcgcaacgccggctccgccagggcga
acccgacgccaccggcgcgcaggcccgcgatggacgtggtgcccgacgacgtctccgacg
acgaccccgacctggcctcgacgggcctggtgggcgtcccgttggtcgtgcagatgctcg
gtggaacggtga
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