KEGG   Paraoerskovia sediminicola: GCM125_18550
Entry
GCM125_18550      CDS       T09128                                 
Name
(GenBank) transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
psek  Paraoerskovia sediminicola
Pathway
psek02020  Two-component system
psek02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:psek00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GCM125_18550
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GCM125_18550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:psek03000]
    GCM125_18550
Transcription factors [BR:psek03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    GCM125_18550
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 MarR_2 GntR Crp HTH_3 HTH_24 MarR HTH_Cmi2_C Xre-like-HTH Sigma70_r4 HTH_IclR TrmB HTH_29 Sigma70_r4_2 YfeC-like HTH_23 DUF977 wHTH-PRTase_assc
Other DBs
NCBI-ProteinID: BDZ42556
LinkDB
Position
complement(1939715..1940398)
AA seq 227 aa
MRVDDDVVLSAPLFATMEREETSRLLESMTQIELARGEVLFRENERGDRLYVIAEGKIKL
GRRSNDGRENLLSILGPSEMFGELSLFDPGPRTATASAVSDAVVYELGHQQLVSWIELHP
GVATHLLHALARRLRRTNETLADLVFSDVPGRVAKALLDLSDRFGETTDEGMRVAHDLTQ
EELAQLVGASRETVNKALADFAARGWVRREGRAVVLLDLDRLERRAR
NT seq 684 nt   +upstreamnt  +downstreamnt
gtgcgcgtggacgacgacgttgtgctctcggccccgctcttcgcgaccatggagcgcgag
gagaccagtcgactcctggagtcgatgactcagatcgagctggcccggggcgaggtgctc
ttccgcgagaacgagcgaggcgaccgcctctacgtgatcgccgagggcaagatcaagctc
ggccgacgatccaacgacggacgcgagaacctgctctcgatcctcggaccgagcgagatg
ttcggcgagctctcgctcttcgacccggggccccgcaccgccacggcgagcgccgtctcc
gacgccgtggtctacgagctcggccaccagcagctcgtcagctggatcgagctccacccc
ggtgtcgccacccacctgctgcacgcgctcgcccggcggctgcgccggaccaacgagacg
ttggcggacctggtgttctccgacgtccccggccgcgtcgccaaggcgctcctcgatctg
tcggaccgcttcggcgagaccacggacgagggcatgcgcgtcgcccacgacctcacgcag
gaggagctggcgcagctcgtcggcgcctcgcgcgagacggtgaacaaggcgctcgccgac
ttcgcggctcgcgggtgggtgcgccgcgaggggcgcgccgtcgtcctgctcgacctcgac
cggctcgagcgccgcgcccgctag

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