KEGG   Paraoerskovia sediminicola: GCM125_22460
Entry
GCM125_22460      CDS       T09128                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
psek  Paraoerskovia sediminicola
Pathway
psek00300  Lysine biosynthesis
psek00470  D-Amino acid metabolism
psek01100  Metabolic pathways
psek01110  Biosynthesis of secondary metabolites
psek01120  Microbial metabolism in diverse environments
psek01230  Biosynthesis of amino acids
Module
psek_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psek00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    GCM125_22460 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    GCM125_22460 (lysA)
Enzymes [BR:psek01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     GCM125_22460 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BDZ42947
LinkDB
Position
2352936..2354288
AA seq 450 aa
MDVRSLVEEHGTPVYVIDEADLRLRARTFVEAFRAAFAEVGTSVDVYYAGKSFLSVAVAR
WVREEGLRVDTCSGGELAVAVRAGVPGPEIGLHGNNKSDDEIRRAIELRVGRIVIDSAAE
VERVATLAREAGRTSSDPVPVMLRVTTGIHAGGHEFISTAHEDQKFGVSLAGGAALAVLR
DVLAHPELDLVGLHSHIGSQIQDPAGFRAAASALLGLRAELRDVTGRLVPEVDLGGGYGI
AYTSDETPIDVAHLARELAQIVRDACAELGTALPAISIEPGRAISGPAGVTVYRVGVVKP
VTVSGGSGGSGGSGGSGASGEAEEASDGSTFVRTYVSVDGGMSDNIRPALYGATYSVRLA
DREGAAGVLRSRVVGKHCESGDILLPDVELPADVAPGDLLAVPATGAYGRSMASNYNNLL
KPPVVAVRDGVSTVLVRRETEEDLLALDLG
NT seq 1353 nt   +upstreamnt  +downstreamnt
gtggacgtccgttcgctcgtcgaggagcacgggacgcccgtctacgtcatcgacgaggcc
gacctgcggctgcgggcgcggaccttcgtcgaggcgttccgcgccgcgttcgcggaggtc
gggacgtcggtggacgtctactacgcgggaaagtcgttcctgtccgtcgcggtcgcccgc
tgggtgcgcgaggaggggctgcgagtcgacacgtgcagcggcggcgagctcgccgtggcg
gtccgggccggggtgcccggtcccgagatcgggctccacggcaacaacaagtcggacgac
gagatccggcgcgcgatcgagctgcgggtcgggcgcatcgtcatcgactccgcggccgag
gtcgagcgcgtggcgaccctggcccgcgaggcgggccggacgtcgtccgacccggtcccg
gtcatgctgcgcgtgaccacgggcatccacgcgggcgggcacgagttcatctccaccgcg
cacgaggaccagaagttcggggtgtcgctcgcgggcggtgcggcgctcgcggtcctgcgc
gacgtgctggcgcacccggagctcgacctcgtcgggctgcacagccacatcggctcccag
atccaggacccggcgggcttccgggcggcggcgagtgccctgctcgggctccgcgccgag
ctgcgggacgtcaccgggcggctcgtccccgaggtcgacctcgggggcggctacggcatc
gcctacacctcggacgagaccccgatcgacgtggcgcacctcgcccgtgagctcgcgcag
atcgtgcgggacgcctgcgcggagctcggcacggcgctcccggcgatctcgatcgagccc
ggccgcgcgatctccggcccggccggggtgaccgtgtaccgggtcggggtggtcaagccc
gtgaccgtcagcggcggctcaggcggctcaggcggatcgggcggctcgggcgcatcgggc
gaggccgaggaggcgtccgacggctcgacgttcgtccgcacctacgtctcggtcgacggc
ggcatgagcgacaacatccggccggcgctctacggggcgacgtactcggtacggctcgcc
gaccgggagggcgctgcgggcgtgctcaggtcgcgggtcgtcggcaagcactgcgagagc
ggtgacatcctgctccccgacgtcgagctccccgcggacgtggcgccgggcgacctcctc
gcggtccccgcgaccggcgcctacggccgttcgatggcgagcaactacaacaacctgctc
aagccgccggtggtggccgtccgggacggcgtctcgacggtcctggtacggcgcgagacc
gaggaggacctgctcgcgctcgacctggggtga

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