Paraoerskovia sediminicola: GCM125_22460
Help
Entry
GCM125_22460 CDS
T09128
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00300
Lysine biosynthesis
psek00470
D-Amino acid metabolism
psek01100
Metabolic pathways
psek01110
Biosynthesis of secondary metabolites
psek01120
Microbial metabolism in diverse environments
psek01230
Biosynthesis of amino acids
Module
psek_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GCM125_22460 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GCM125_22460 (lysA)
Enzymes [BR:
psek01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GCM125_22460 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BDZ42947
LinkDB
All DBs
Position
2352936..2354288
Genome browser
AA seq
450 aa
AA seq
DB search
MDVRSLVEEHGTPVYVIDEADLRLRARTFVEAFRAAFAEVGTSVDVYYAGKSFLSVAVAR
WVREEGLRVDTCSGGELAVAVRAGVPGPEIGLHGNNKSDDEIRRAIELRVGRIVIDSAAE
VERVATLAREAGRTSSDPVPVMLRVTTGIHAGGHEFISTAHEDQKFGVSLAGGAALAVLR
DVLAHPELDLVGLHSHIGSQIQDPAGFRAAASALLGLRAELRDVTGRLVPEVDLGGGYGI
AYTSDETPIDVAHLARELAQIVRDACAELGTALPAISIEPGRAISGPAGVTVYRVGVVKP
VTVSGGSGGSGGSGGSGASGEAEEASDGSTFVRTYVSVDGGMSDNIRPALYGATYSVRLA
DREGAAGVLRSRVVGKHCESGDILLPDVELPADVAPGDLLAVPATGAYGRSMASNYNNLL
KPPVVAVRDGVSTVLVRRETEEDLLALDLG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtccgttcgctcgtcgaggagcacgggacgcccgtctacgtcatcgacgaggcc
gacctgcggctgcgggcgcggaccttcgtcgaggcgttccgcgccgcgttcgcggaggtc
gggacgtcggtggacgtctactacgcgggaaagtcgttcctgtccgtcgcggtcgcccgc
tgggtgcgcgaggaggggctgcgagtcgacacgtgcagcggcggcgagctcgccgtggcg
gtccgggccggggtgcccggtcccgagatcgggctccacggcaacaacaagtcggacgac
gagatccggcgcgcgatcgagctgcgggtcgggcgcatcgtcatcgactccgcggccgag
gtcgagcgcgtggcgaccctggcccgcgaggcgggccggacgtcgtccgacccggtcccg
gtcatgctgcgcgtgaccacgggcatccacgcgggcgggcacgagttcatctccaccgcg
cacgaggaccagaagttcggggtgtcgctcgcgggcggtgcggcgctcgcggtcctgcgc
gacgtgctggcgcacccggagctcgacctcgtcgggctgcacagccacatcggctcccag
atccaggacccggcgggcttccgggcggcggcgagtgccctgctcgggctccgcgccgag
ctgcgggacgtcaccgggcggctcgtccccgaggtcgacctcgggggcggctacggcatc
gcctacacctcggacgagaccccgatcgacgtggcgcacctcgcccgtgagctcgcgcag
atcgtgcgggacgcctgcgcggagctcggcacggcgctcccggcgatctcgatcgagccc
ggccgcgcgatctccggcccggccggggtgaccgtgtaccgggtcggggtggtcaagccc
gtgaccgtcagcggcggctcaggcggctcaggcggatcgggcggctcgggcgcatcgggc
gaggccgaggaggcgtccgacggctcgacgttcgtccgcacctacgtctcggtcgacggc
ggcatgagcgacaacatccggccggcgctctacggggcgacgtactcggtacggctcgcc
gaccgggagggcgctgcgggcgtgctcaggtcgcgggtcgtcggcaagcactgcgagagc
ggtgacatcctgctccccgacgtcgagctccccgcggacgtggcgccgggcgacctcctc
gcggtccccgcgaccggcgcctacggccgttcgatggcgagcaactacaacaacctgctc
aagccgccggtggtggccgtccgggacggcgtctcgacggtcctggtacggcgcgagacc
gaggaggacctgctcgcgctcgacctggggtga
DBGET
integrated database retrieval system