Paraoerskovia sediminicola: GCM125_23280
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Entry
GCM125_23280 CDS
T09128
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00970
Aminoacyl-tRNA biosynthesis
psek01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GCM125_23280 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
psek03029
]
GCM125_23280 (gatB)
Enzymes [BR:
psek01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
GCM125_23280 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
GCM125_23280 (gatB)
Mitochondrial biogenesis [BR:
psek03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
GCM125_23280 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
BDZ43029
LinkDB
All DBs
Position
2446505..2448013
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AA seq
502 aa
AA seq
DB search
MSTRTVDLVDYDDAVRRYDPVLGIEVHVELGTVTKMFCGAEVEFGGEPNTQVTPVSLGLP
GALPVVNRTAVESAIKIGLALNCSIAESCRFARKNYFYPDNPKNFQTSQYDEPIAFDGYL
DVELEDGTVFRVEIERAHMEEDAGKNTHVGGAGGRISGAEYSLVDYNRAGIPLVEIVTRP
IEGVGERAPEIARAYVKTLRDIFRALDVSEARMERGNVRADVNLSLRATPESPLGTRTET
KNVNSFRSVERAVRYEVSRQAALLDAGDAVVQETRHWHEDRGVTSSGRVKSDAEDYRYFP
EPDLVPVAPARSWVESLRAAQPELPVERRRRLQGEWGYADAEMRDVVNADAIDIIEATVA
AGSSPAGARKWWMGELARRAKSAEVELAELPVTPGQVAQLQGLVDSGRINDKLARQALEG
VLAGEGDPEQVVVARGLEVVSDDGPLLEAIDAALAAQPDIAEKIRSGNLGPVGAIIGAVM
KATRGQADAGRVRELVIERTSA
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacccgcaccgtcgacctcgtcgactacgacgacgccgtccgccgctacgacccg
gtcctcggcatcgaggtccacgtcgagctgggcaccgtcaccaagatgttctgcggcgcc
gaggtcgagttcggcggtgagcccaacacgcaggtgaccccggtgtccctggggctcccg
ggcgcgctgcccgtcgtgaaccgcacggcggtcgagtccgcgatcaagatcggcctcgcg
ctgaactgctcgatcgccgagtcctgccggttcgcccggaagaactacttctacccggac
aacccgaagaacttccagacctcccagtacgacgagccgatcgcgttcgacggctacctg
gacgtcgagctcgaggacggcaccgtgttccgcgtggagatcgagcgcgcgcacatggag
gaggacgcaggcaagaacacgcacgtcggcggggccggcgggcgcatcagcggtgccgag
tactcgctggtcgactacaaccgcgccgggatcccgctcgtcgagatcgtgacgcgcccg
atcgagggcgtcggcgagcgtgcgcccgagatcgcgcgcgcctacgtcaagaccctgcgc
gacatcttccgggcgctcgacgtctccgaggcgcggatggagcgcgggaacgtccgcgcg
gacgtgaacctgtcgctgcgggcgacccccgagtccccgctcggcacccggaccgagacg
aagaacgtcaactcgttcaggtcggtggagcgcgcggtgcgctacgaggtctcccgccag
gcagccctgctggacgcgggcgacgccgtcgtccaggagacgcgccactggcacgaggac
cgcggcgtcacgagctcgggtcgcgtgaagtccgacgcggaggactaccgctacttcccg
gagcccgacctggtcccggtcgccccggcgcggtcctgggtcgagtcgctgcgcgcggca
cagcccgagctgcccgtcgagcggcgccgccgcctccagggcgagtggggctacgcggac
gccgagatgcgcgacgtcgtgaacgccgacgcgatcgacatcatcgaggcgacggtcgcc
gccgggtcgagtcccgcaggcgcccgcaagtggtggatgggcgagctcgcgcgccgcgcg
aagtccgccgaggtcgagctcgcggagctcccggtgacccccgggcaggtcgcgcagctc
caggggctcgtcgactccggtcgcatcaacgacaagctcgcgcgacaggccctcgaaggc
gtgctcgcgggcgagggcgaccccgagcaggtcgtcgtcgcgcgcgggctcgaggtcgtg
tcggacgacggcccgctcctcgaggcgatcgacgccgcgctcgccgcgcagcccgacatc
gccgagaagatccggtccgggaacctcgggccggtcggcgcgatcatcggcgccgtcatg
aaggcgacccgcgggcaggcggacgcggggcgcgtccgggagctcgtgatcgagcggacg
agcgcgtga
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