Paraoerskovia sediminicola: GCM125_24870
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Entry
GCM125_24870 CDS
T09128
Name
(GenBank) DNA-binding protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek03030
DNA replication
psek03430
Mismatch repair
psek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM125_24870
03430 Mismatch repair
GCM125_24870
03440 Homologous recombination
GCM125_24870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psek03032
]
GCM125_24870
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_24870
Enzymes [BR:
psek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM125_24870
DNA replication proteins [BR:
psek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM125_24870
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM125_24870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BDZ43188
LinkDB
All DBs
Position
2616048..2616980
Genome browser
AA seq
310 aa
AA seq
DB search
MLVQGTEGLLADRAVARVVERLRENDPETERVDLEAATYEAGMLSVATSPSLFGEAKVVI
LRGAEACSDAFVTDMVAYAEAPDPGTTVVVVHGGGQRGKKMLDAIRRSGAPVVACEPVKK
DADRAAFVLAEFRAASRRIDQAAVRALVEALGNDLRELASACSQLVTDTTGSVTVAVVDR
YYGGRVEATGFRVADEAVAGNTGEAVALLRHALDTGADPVPLVAALAMKLRALAKVAAMR
GSGGPSAKELGLAPWQIDRAKRELNRWTPEGLAAAILAVAQADEEVKGGGRDPVFAVERA
VLTVARSSGR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgtgcagggcaccgagggcctcctcgccgaccgggcggtcgcacgcgtcgtcgag
cgtctccgagagaacgacccggagaccgagcgcgtcgacctggaggccgcgacctacgag
gccgggatgctctcggtggcgaccagcccctcgctgttcggtgaggcgaaggtcgtgatc
ctgcgcggtgcggaggcgtgctccgacgcgttcgtgaccgacatggtcgcctacgcggag
gcgcccgaccccggcacgacggtcgtcgtcgtgcacggaggcggccagcggggcaagaag
atgctcgacgcgatccgccgcagcggagccccggtggtggcgtgcgaaccggtgaagaag
gacgcggaccgcgccgcgttcgtcctcgcggagttccgggcggcgtcgcgacgtatcgac
caggcggcggtgcgggcgctcgtcgaggccctgggcaacgacctgcgcgagctcgcctcg
gcctgctcccagctggtcaccgacacgaccggctcggtgacggtggccgtggtcgaccgc
tactacgggggccgcgtggaggcgacggggttccgggtcgccgacgaggccgtcgccggc
aacaccggtgaggccgtcgcgctgctgcggcacgccctcgacaccggggcggacccggtg
ccgctggtggcggccctcgcgatgaagctgcgcgcgctcgccaaggtcgccgcgatgcgg
gggagcggcggtccgtcggccaaggagctcggtctcgcgccgtggcagatcgaccgggcg
aagcgcgagctgaaccggtggacgcccgagggcctggccgcggcgatccttgctgtcgcg
caggccgacgaggaggtcaagggcggcgggcgcgacccggtgttcgcggtcgagcgggcc
gtcctgaccgtggcgcggtcgagcggacgctga
DBGET
integrated database retrieval system
