Paraoerskovia sediminicola: GCM125_26280
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Entry
GCM125_26280 CDS
T09128
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek03030
DNA replication
psek03430
Mismatch repair
psek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM125_26280
03430 Mismatch repair
GCM125_26280
03440 Homologous recombination
GCM125_26280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psek03032
]
GCM125_26280
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_26280
Enzymes [BR:
psek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM125_26280
DNA replication proteins [BR:
psek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM125_26280
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM125_26280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDZ43329
UniProt:
A0ABM8G550
LinkDB
All DBs
Position
complement(2754880..2755764)
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AA seq
294 aa
AA seq
DB search
MTNEPYPRLSVVREVSDDGAHHIGPFGSRRAAQDAVDAIHEAVPLRRCTRRLPKVAPAGA
TACALAEIGRCSAPCLPRSPDSTIESAADAGAGTTTGSASGTAPGTAPGRANGTAISDTA
GGYAATVDLARSAMLGDASAVVTALSEQIRRHSRSEEYEQAGDVSRRLGSFLRGASRTQS
IGRLAACPEVVAARPTEDAGWELVVIKHARLAATAVAPRGEDPRPHVDALRATADDVPAP
VLPAPACHPHEADIVLAWLDRPGTRLVEIDGVWSSPVRSALSYDDLAAAVASSG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaacgagccgtacccccgcctgtcggtcgtgcgcgaggtgtcggacgacggcgcg
caccacatcggtcccttcggttcgcgccgcgcggcccaggacgcggtcgacgccatccac
gaggcggtcccgctgcgccggtgcacccggcgtctgccgaaggtcgcaccggccggtgcc
acggcgtgcgccctcgcggagatcggccgctgctcggcgccctgcctcccgaggtctccc
gactccacgatcgagtccgcggccgacgctggggccggcaccacgaccggcagtgcttcc
ggcacagcgcccggcacagcgcccggcagagcgaacggcacagcgatcagcgacacggcc
ggtggctatgcggccacggtcgacctggcgcgctcggcgatgctcggcgacgcctcggcg
gtcgtgaccgcgctctcggagcagatccgccgccactcgcggtccgaggagtacgagcag
gccggggatgtctcgcgccgcctcgggtcgttcctgcggggtgcgagccgcacgcagtcg
atcgggcgtctcgccgcgtgcccggaggtggtcgcggcacgtcccaccgaggacgccggg
tgggagctcgtcgtcatcaagcacgcccggctggccgccaccgccgtggctccccggggc
gaggacccgcgcccgcacgtcgacgcgctgcgcgccaccgccgacgacgtcccggcaccc
gtcctgccggcgcccgcgtgccacccgcacgaggcggacatcgtcctcgcctggctcgat
cggccgggcacccgcctcgtcgagatcgacggcgtctggtcgtccccggtccgttccgcg
ctgtcgtacgacgacctcgcggcggcggtcgcgtcgtccggctag
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