Paraoerskovia sediminicola: GCM125_26290
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Entry
GCM125_26290 CDS
T09128
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek03030
DNA replication
psek03430
Mismatch repair
psek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM125_26290
03430 Mismatch repair
GCM125_26290
03440 Homologous recombination
GCM125_26290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psek03032
]
GCM125_26290
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_26290
Enzymes [BR:
psek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM125_26290
DNA replication proteins [BR:
psek03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM125_26290
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM125_26290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BDZ43330
LinkDB
All DBs
Position
complement(2755776..2756759)
Genome browser
AA seq
327 aa
AA seq
DB search
MSVATRTLPGMVEIGTAARPADTLRAFQPSLDDIGTPLHEVTFVVVDLETTGTSAAECGI
TEFGAVKVRGGEVIGEFQSLVDPGVVVPAFIARLTGISTAMVATAPGIEKVLPSFLEFLG
TGVLVAHNAPFDVGFLKAACSRLGYEWPRPQVLDTVALSRKVVLRDEAPNHRLSTLAALF
GAQVTPDHRALSDARATVDVLHALLSRLAPLGITHLEDLATATDPVPPAVRRKRHLADGL
PDSPGVYMFVGPSDEVLYVGTSVSIRRRVRSYFTAAERRSRITEMVGIATHVVPVPCATV
LESQVRELRLIAEHSLGTTAGPSSRNG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggtggccacccgtacgctccccggcatggtggagatcggcaccgcggctcgcccg
gcggacaccctccgggcgttccaaccgtcgctcgacgacatcgggacacccctgcacgag
gtgaccttcgtcgtcgtcgacctcgagaccaccggcacctccgccgccgagtgcggcatc
accgagttcggcgccgtgaaggtgcgcggcggagaggtgatcggcgagttccagtcgctc
gtcgaccctggcgtcgtcgtgccggccttcatcgcgcggctcacggggatcagcaccgcg
atggtcgccaccgccccgggcatcgagaaggtgctgccgagcttcctcgagttcctcggc
accggcgtgctcgtcgcgcacaacgccccgttcgacgtcgggttcctcaaggcggcctgc
tcgcggctcgggtacgagtggccacgcccccaggtgctcgacacggtcgccctgtcccgc
aaggtggtcctgcgcgacgaggcccccaaccaccggctgtccaccctcgcggctctcttc
ggcgcacaggtcaccccggaccaccgcgcgctctccgacgcccgggcgaccgtcgacgtc
ctccacgcgctcctgtcccgcctcgccccgctggggatcacccacctcgaggacctcgcc
acggcgacggaccccgtgcctccggcggtccggcgcaagaggcacctcgccgacgggctc
ccggactccccgggcgtctacatgttcgtcggcccgtccgacgaggtcctctacgtcggc
acgtcggtgtcgatccggcggcgggtccgcagctacttcaccgcggccgagcggcggtcg
cgcatcaccgagatggtcggcatcgccacgcatgtcgtccccgtgccctgcgccacggtg
ctcgagtcccaggtgcgcgagctccggctgatcgccgagcactccctcggtacaaccgca
ggtccaagttcccggaacggatga
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