Paraoerskovia sediminicola: GCM125_26400
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Entry
GCM125_26400 CDS
T09128
Name
(GenBank) geranylgeranyl pyrophosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00900
Terpenoid backbone biosynthesis
psek01100
Metabolic pathways
psek01110
Biosynthesis of secondary metabolites
Module
psek_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
GCM125_26400
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
GCM125_26400
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psek01006
]
GCM125_26400
Enzymes [BR:
psek01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
GCM125_26400
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
GCM125_26400
2.5.1.29 geranylgeranyl diphosphate synthase
GCM125_26400
Prenyltransferases [BR:
psek01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
GCM125_26400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDZ43341
LinkDB
All DBs
Position
complement(2766487..2767704)
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AA seq
405 aa
AA seq
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MDERTTTGLLTTPPHTPGQRAYAGAVHLEPTSATAPRAGTTTDPLVAEAVREDVDAAVTR
RLDVLAADLARVDPGAAPVLAEATALLTGGKRLRAAFCYWSWRAHGGAHESEHRAAAVGA
GAALELFQAAALVHDDVMDRSDTRRGRPAAHRAFENLHTGERWTGDGEQFGTSGAILLGD
VLLVACGAAFREATAEIPAPDAERARTTFDFMQTEVTLGQFLDVRAQSVPWGDDADADEE
RARVVLRTKSARYSVEHPVRIGAALAGADDADLEASASFGLPIGEAFQLRDDLLGVFGDP
QVTGKPAGDDLREGKRTLLVNRALRSASDAGRRLLLERLGAPDLEADEIDRMKEILTSTG
AVADVEVMIATRVERALAALDATSLDPDGAARLTELAVAATRRRS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
gtggacgagcggacgacgacgggcctgttgacgactccgccacacacgccgggacaacgg
gcctacgctggagcggtgcacctcgaaccgacgtccgcgaccgccccacgagccgggacg
acgaccgacccgctggtcgcggaggcagtccgggaggacgtcgacgccgccgtcacccga
cgcctcgacgtcctcgccgcagacctcgcccgggtcgacccgggtgccgctccggtcctc
gccgaggcgacggcgctgctgaccgggggcaagcggttgcgcgccgcgttctgctactgg
tcgtggcgcgcccatggcggtgcgcacgagtccgagcaccgcgccgcggcggtcggcgcc
ggcgccgcgctcgagctcttccaggcggccgcgctcgtgcacgacgacgtcatggaccgg
tcggacacccgacgcgggaggcctgccgcgcaccgcgccttcgagaacctgcacaccggg
gagcggtggaccggcgacggggagcagttcggcaccagcggcgcgatcctcctcggcgac
gtcctgctcgtcgcctgcggcgccgcgttccgcgaggccacggccgagatccccgcgccg
gacgccgagcgagcccgcacgaccttcgacttcatgcagaccgaggtgacgctgggccag
ttcctcgacgtccgcgcccagagcgtcccctggggcgacgacgccgacgccgacgaggag
cgcgcccgcgtggtcctgcggaccaagtccgcccgctactcggtcgagcacccggtcagg
atcggcgccgcgctcgcgggagctgacgacgccgacctcgaggcgtccgcgtcgttcggc
ctgcccatcggcgaggcgttccagctccgggacgacctgctcggcgtcttcggcgacccc
caggtcaccggcaaacccgccggtgacgacctccgcgagggcaagcgcacgctgctcgtg
aaccgggcgctgcgcagcgcgagcgacgccggacgccggctcctgctcgagcgcctcggc
gcgcccgacctcgaggccgacgagatcgaccggatgaaggagatcctgacgtcgacaggt
gcggtcgccgacgtcgaggtgatgatcgcgacacgcgtcgagcgagcgctcgcggcgctc
gacgcgacgagcctcgacccggacggcgcggcacggctcaccgagctcgcggtcgcggcg
acgcggcgccgttcctga
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