Paraoerskovia sediminicola: GCM125_27180
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Entry
GCM125_27180 CDS
T09128
Symbol
dinB_1
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
psek
Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_27180 (dinB_1)
Enzymes [BR:
psek01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM125_27180 (dinB_1)
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
GCM125_27180 (dinB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
HHH_5
Cdd1
DUF4332
DNA_pol_lambd_f
POLH-Rev1_HhH
DUF4440
Motif
Other DBs
NCBI-ProteinID:
BDZ43419
LinkDB
All DBs
Position
complement(2853340..2854755)
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AA seq
471 aa
AA seq
DB search
MDHDLLADAARQRSRPTILHADADSFFAAVEQRDKPSLRGKPVLVGGTGGRGVVSTASYE
ARVSGARSAMPMSRARRLAPAAAVLSPRFEAYSAYSRVIMRELGTLSELLEPLSIDEAFV
DLDAGPHADDPAAAAVAVRARIRERTGLAVSIGAGRSKLVAKIASDAAKPDGLLVVAPED
EDEFLLPLPVRAIPGVGPATSAALERIDVRTVADLRRQDPDVLAETVGESAGVSLYRLSR
GVDLRPVAPSGERKSVGAERTFAADIFGDATIRAAVDTVADEALGRLETHGGGARTVVAK
VRFADFTTVTRSVTLTHPSGDPATLREAAHQAAHAAGITDSVRLLGVSFHNLSPHAQLTL
DWDGDRTPGAAGAPAAATPSDDVPRFSPSPRAAGRAGPRLLDEAGSRPGLDVEHPTLGRG
WVVHVRGREATVRFETVDTPPARSRVVDLDTDPLTIVPPLAAIVLEEDEGA
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtggaccacgacctgctcgccgacgcggcgcgccagcggtcccgaccgacgatcctgcac
gccgacgcggactcgttcttcgcggccgtcgagcagcgcgacaagccgtcgctgcgcggc
aagccggtgctcgtcggcgggacgggcgggcgcggcgtcgtgtccacggcgtcgtacgag
gcgcgggtctcgggcgcccgctcggcgatgccgatgtcccgcgcccggcgtctcgccccc
gccgccgcggtcctctcgcctcggttcgaggcgtattccgcgtactcgcgggtcatcatg
cgcgagctcgggacgctgtcggagctgctcgaaccgctcagcatcgacgaggcgttcgtg
gacctggacgcgggcccgcacgcggacgacccggccgcggccgccgtggctgtccgggcg
cggatccgtgagcgcacgggcctcgcggtgtcgatcggcgcgggccgctcgaagctcgtc
gcgaagatcgcgtcggacgcggcgaagcccgacggtctgctcgtcgtcgcgccggaggac
gaggacgagttcctgctgcccctgccggtgcgcgcgatcccaggcgtcgggccggccacg
tcggccgcgctggagcgcatcgacgtccgcacggtcgcggacctgcgccgccaggatccc
gacgtgctcgccgagacggtgggcgagtcggcgggggtgtccctgtaccggctgtcgcgc
ggcgtcgacctccgtccggtcgcgccgtcgggcgagcgcaagtcggtcggcgccgagcgc
acgttcgcggccgacatcttcggggacgcgaccatccgggcagcggtggacacggtcgcc
gacgaggcgctcggcaggctggagacgcacgggggcggggcgcgcacggtcgtcgccaag
gtccgtttcgcggacttcaccaccgtcacccggtcggtgaccctcacccacccgagcggg
gaccccgcgaccctgcgcgaggctgcccaccaggcggcgcacgccgccggcatcaccgac
tccgtgcgactcctaggtgtctcgttccacaacctctcgccgcacgcccagctcaccctc
gactgggacggcgaccgcaccccgggcgcagccggggcgcccgccgccgcgacgccgtcc
gacgacgtcccgcgcttctccccgtcgccgcgcgccgccgggcgggcgggaccgcgcctg
ctcgacgaggcgggcagccggccggggctcgacgtcgagcacccgaccctgggtcgaggg
tgggtcgtgcacgtgcgcggccgcgaggcgacggtccggttcgagacggtcgacaccccg
ccggcccggtcacgcgtcgtcgacctggacaccgacccgctcacgatcgtcccgccgctc
gcagccatcgtcctcgaggaggacgaaggtgcctga
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