Paraoerskovia sediminicola: GCM125_27680
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Entry
GCM125_27680 CDS
T09128
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek00750
Vitamin B6 metabolism
psek01100
Metabolic pathways
psek01240
Biosynthesis of cofactors
Module
psek_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GCM125_27680 (pdxS)
Enzymes [BR:
psek01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GCM125_27680 (pdxS)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
IGPS
NMO
TetR_C_27
DHO_dh
Glu_synthase
Motif
Other DBs
NCBI-ProteinID:
BDZ43469
UniProt:
A0ABM8G5T0
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All DBs
Position
2904200..2905108
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AA seq
302 aa
AA seq
DB search
MSSEKSPETQSVGTARVKRGMAEMLKGGVIMDVVNAEQAKIAEDAGAVAVMALERVPADI
RAQGGVSRMSDPDMIDGIIEAVSIPVMAKARIGHFVEAQVLQSLGVDYIDESEVLTPADY
ANHIDKWNYTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRQIRQQLT
RLASLPEDELFVAAKELQAPYELVKEVAATGKLPVVLFTAGGIATPADAAMMMQLGAEGV
FVGSGIFKSGNPAERAAAVVKATTFYDDPDVIAKVSRGLGEAMVGINVDEIPEPHRLAER
GW
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcgagaagagccccgagacccagagcgtcggcacggcccgcgtcaagcgcggc
atggccgagatgctcaagggcggcgtcatcatggacgtggtgaacgccgagcaggcgaag
atcgcggaggacgccggagcggtcgcggtcatggcgctcgagcgggtccccgcggacatc
cgtgcgcagggcggcgtgtcgcggatgagcgaccccgacatgatcgacgggatcatcgag
gccgtctcgatccccgtcatggcgaaggcgcgcatcggtcacttcgtcgaggcgcaggtg
ctgcagtccctcggcgtcgactacatcgacgagtccgaggtccttaccccggccgactac
gcgaaccacatcgacaagtggaactacaccgttcccttcgtctgcggtgccaccaacctg
ggcgaggcgctgcggcgcatcaccgagggcgcggcgatgatccgctcgaagggtgaagcg
gggaccggcgacgtctccaacgcgaccacgcacatgcgccagatccgccagcagctcacg
cgcctcgcgtcgctgccggaggacgagctgttcgtcgcggccaaggaactgcaggccccg
tacgagctcgtcaaggaggtcgcggccacgggcaagcttcccgtcgtgctgttcacggcg
ggcgggatcgcgaccccggccgacgccgccatgatgatgcagctcggcgccgagggcgtg
ttcgtcggttccggcatcttcaagtcgggcaacccggccgagcgcgcggcagcggtcgtc
aaggccacgacgttctacgacgaccccgacgtcatcgcgaaggtctcgcgcggcctgggc
gaggccatggtcggcatcaacgtcgacgagatccccgagccgcaccgcctcgccgagcgc
ggttggtga
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