Paraoerskovia sediminicola: GCM125_27780
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Entry
GCM125_27780 CDS
T09128
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM125_27780 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_27780 (ruvB)
Enzymes [BR:
psek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM125_27780 (ruvB)
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM125_27780 (ruvB)
RecFOR pathway proteins
GCM125_27780 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Resolvase
Motif
Other DBs
NCBI-ProteinID:
BDZ43479
LinkDB
All DBs
Position
2910843..2911658
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AA seq
271 aa
AA seq
DB search
MIIANELGTSLRVTSGPAIQHAGDLAAVLSSLEEGEVLFIDEIHRLARPAEELLYVAMED
FRVDVVVGKGAGASAIPLSLPPFTVVGATTRAGLLPAPLRDRFGFTGHLDFYDPAELERV
ITRSARLLGAPLAHAAAHEIAGRSRGTPRIANRLLRRVRDWAQVRGDGTLDLAAARAALE
VYEVDELGLDRLDRSVLRALCTRFGGGPVGLSTLAVTVGEEGETVETVAEPYLVREGLIG
RTPRGRVATPAAWEHLGLVPPKPEGLLFDQG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgccaacgagctcggtacgtcgctgcgtgtcacgtccgggcctgcgatccag
cacgccggggacctcgccgccgtcctgtcctcgctcgaggagggcgaggtcctgttcatc
gacgagatccacaggctcgcgcgaccggccgaggagctcctgtacgtcgccatggaggac
ttccgggtcgacgtcgtcgtgggcaagggggcgggggcgagcgcgatcccgctgagtctg
ccgccgttcacggtggtcggtgccacgacccgcgccgggctgctcccggcgcccctgcgc
gacaggttcgggttcaccgggcacctcgacttctacgaccccgcggagctcgagcgggtc
atcaccaggtcggccaggctgctcggggcaccgctcgcgcacgccgcggcgcacgagatc
gccgggcggtcccgaggcaccccgcgcatcgccaaccgcctcctgcgccgggtcagggac
tgggcccaggtccgcggcgacggcaccctcgacctcgcggccgcccgcgccgccctcgag
gtgtacgaggtcgacgagctcggcctcgaccgcctcgaccgctcggtgctccgagcgctg
tgcacccggttcggaggcgggccggtcggcctgtcgacgctcgccgtcacggtcggcgag
gagggcgagacggtcgagacggtcgcggagccctatctcgtccgggaggggctgatcggc
cgcaccccgcggggacgcgtggcgacccctgctgcctgggaacacctcgggctcgtcccc
ccgaagcccgaggggcttctcttcgaccagggctga
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