Paraoerskovia sediminicola: GCM125_28040
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Entry
GCM125_28040 CDS
T09128
Name
(GenBank) hypothetical protein
KO
K07082
peptidoglycan lytic transglycosylase G [EC:
4.2.2.29
]
Organism
psek
Paraoerskovia sediminicola
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psek01011
]
GCM125_28040
Enzymes [BR:
psek01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GCM125_28040
Peptidoglycan biosynthesis and degradation proteins [BR:
psek01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GCM125_28040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YceG
CBM_35_2
YqiJ_N
KdgM
Motif
Other DBs
NCBI-ProteinID:
BDZ43505
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All DBs
Position
2942682..2943830
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AA seq
382 aa
AA seq
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MSDLFAGTSTTEPAAAPLGSRSDLKRDRRAKKRKAQRRRRTALLLVVILAVLAAAGWVLR
DQVMSFLDDIKPEAVADYPGPGIDPVDVTINPGDTGSVMGRELVSADVVESVEAFNIAFE
ANPNSGSIQPGTHQMLTQMSAEGAVARLVANENRVETKLTIPEGYTVDQILERATAVTGI
AREDFEAAMEDNDATGLPDVAGGEYEGWLFPTTYLLAPDSNATSILSDMVTQTVLQLDDA
GVAEEDREEVLTEASLIEREAANDEDRAKMARAIDNRIEQGMPLQIDAAVAYGAGKPGTE
LTTSDLEDESNEYNLYVNPGLPPTPIAAPGRASIDAVMNPADGDWLFWTTVNLDTGETKF
AATYEEHQENVAELREWQAANG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatctgttcgctgggacctcgacgacggagcccgcagcggcgcctctcgggtcc
cgctcggacctcaagcgcgaccgccgtgcgaagaagcgcaaggcgcagcgccgtcggcgt
acggcgctgctgctggtcgtgatcctcgcggtcctcgcggccgccgggtgggtcctgcgc
gaccaggtgatgtcgttcctcgacgacatcaagcccgaggcggtcgcggactacccagga
ccggggatcgatcccgtcgacgtgacgatcaaccccggggacaccgggtccgtgatggga
cgcgagctcgtctcggcggacgtcgtcgagagcgtcgaggcgttcaacatcgccttcgag
gcgaacccgaactccggctcgatccagccgggcacgcaccagatgctcacgcagatgtcg
gcggagggtgcggtcgcccgcctggtcgcgaacgagaaccgggtcgagaccaagctgacg
atcccggaggggtacaccgtcgaccagatcctcgagcgcgccacggcggtcaccgggatc
gcccgggaggacttcgaggcggcgatggaggacaacgacgcgacgggcctgcccgacgtc
gccggcggcgagtacgagggttggctcttcccgacgacgtacctgctggcccccgactcg
aacgcgacctcgatcctcagcgacatggtgacgcagacggtgctccagctggacgacgcc
ggtgtggctgaggaagaccgggaagaggtcctcaccgaggcgtccctgatcgagcgcgag
gcggcgaacgacgaggaccgcgccaagatggctcgcgccatcgacaaccggatcgagcag
ggcatgccgctccagatcgatgctgccgtcgcgtacggcgcgggcaagcccgggaccgag
ctcacgacgagcgacctcgaggacgagtccaacgagtacaacctctacgtgaacccgggg
ctgccgccgaccccgatcgccgcccccgggcgcgcgtcgatcgacgcggtcatgaacccc
gccgacggcgactggctgttctggacgaccgtgaacctcgacaccggcgagaccaagttc
gccgcgacgtacgaggagcaccaggagaacgtggccgagctgcgcgagtggcaggcggcg
aacggctga
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