KEGG   Paraoerskovia sediminicola: GCM125_28450
Entry
GCM125_28450      CDS       T09128                                 
Symbol
polA
Name
(GenBank) DNA polymerase
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
psek  Paraoerskovia sediminicola
Pathway
psek03030  DNA replication
psek03410  Base excision repair
psek03420  Nucleotide excision repair
psek03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:psek00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GCM125_28450 (polA)
   03410 Base excision repair
    GCM125_28450 (polA)
   03420 Nucleotide excision repair
    GCM125_28450 (polA)
   03440 Homologous recombination
    GCM125_28450 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:psek03032]
    GCM125_28450 (polA)
   03400 DNA repair and recombination proteins [BR:psek03400]
    GCM125_28450 (polA)
Enzymes [BR:psek01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GCM125_28450 (polA)
DNA replication proteins [BR:psek03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GCM125_28450 (polA)
DNA repair and recombination proteins [BR:psek03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GCM125_28450 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GCM125_28450 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 HHH_5 DNA_pol_lambd_f HHH
Other DBs
NCBI-ProteinID: BDZ43546
UniProt: A0ABN6XJ31
LinkDB
Position
2986175..2989108
AA seq 977 aa
MAYRAFFALPVENFSTTTGQSTNAVFGFTSMLINLLRDEKPTHIAVAFDAGSATFRTEQL
PTYKAGRAATPEPFKGQVPLIREVLEALNVPALEKANFEADDIFATLSTQAAALGMEVLV
CSGDRDAFQLVTDDVTVLYPKRGVSDLARMTPDAVEEKYGVRPENYPDLAALVGETADNL
PGVPGVGPKTAAKWIAQFGDLDAVLDGAETIKGKAGENLRAHLEQVRTNRRLNALLRDME
LPLGPDDLGLRPWDRTAVHTVFDALEFAALRERLLALGGSDDEVDAAPAMTVDVADPGPD
GLGEWLSARADVTLGLDVEGRTAPTGADAWAVTVTDGSEAVVVDLADVSAADESALAAWL
ADDARAIVVHGAKSAAHALAARGMDLRGVTFDTELAAYLCYPDQRGYDLSDLAVRHLHRE
LRVDDEPEAQGALDLSVDGSGAGRQAAARAAAVLELSEALVEVLADRGATGLLRDLELPL
THVLGDMERAGIAVDVEHLTGLERHFAGQVAQAAADAYEVIGREVNLGSPKQLQEVLFDQ
LEMPKTKKIKTGWTTDAAALAELFVKTGHPFLEHLLAHRDATRLRQTVEGLLKSVADDAR
VHTSFQQTIAATGRLSSTDPNLQNIPIRTEAGRRIRRAFVVGPGYETLLTADYSQIEMRI
MAHLSGDEGLIDAFRSGEDLHNYVGSRVFDVPADEVTPAMRSKIKAMSYGLAYGLSSYGL
SKQLSIGVPEAQSLMDDYFSRFGESGTTSRGSSTKRGPRGTPRRSSGVAGTSRTSRATTG
SGGTWRSAWRSTRRSRGAQQTSSRSRCSGSATRSTPADSRRACCCRCTTSCSSRWHRGRR
TRSSASSAPRWGPRPSSRCRWTCRSVSVPAGTTPATDQGGRRRRPQLPAAGAAVTAGRRH
PGRRATTTMVPGISRPRTGPHPPQTCWLLSGHSGSTTSTTWRPAETTSLTWSPTVRWYSA
YVTRPAPSDSTYGRRSK
NT seq 2934 nt   +upstreamnt  +downstreamnt
atggcgtaccgcgcgttcttcgcgctcccggtcgagaacttctccacgacgaccggccag
tccaccaacgccgtcttcggtttcacgtcgatgctcatcaacctcctgcgggacgagaag
ccgacgcacatcgccgtcgcgttcgacgccgggagcgcgacgttccgcaccgagcagctc
ccgacctacaaggccggtcgcgctgcgacgccggagcccttcaaggggcaggtgccgctg
atccgcgaggtgctcgaggcgctcaacgtcccggccctggagaaggcgaacttcgaggcg
gacgacatcttcgcgaccctctcgacccaggccgccgcgctcggcatggaggtcctggtg
tgctccggcgaccgggacgcgttccagctcgtgaccgacgacgtgacggtgctctacccc
aagcggggcgtctccgacctggcacgcatgacccccgacgcggtcgaggagaagtacggc
gtccgccccgagaactacccggacctcgccgcactcgtgggcgagaccgcggacaacctc
cccggtgtccccggcgtcgggccgaagaccgccgcgaagtggatcgcccagttcggcgac
ctcgacgcggtgctcgacggcgccgagacgatcaagggcaaggcaggcgagaacctgcgg
gcccacctcgagcaggtgcggacgaaccgccggctcaacgcgctgctgcgcgacatggag
ctgccgctcggtcccgacgatctcggcctacgaccctgggaccgcacagcggtgcacacg
gtcttcgacgcgctcgagttcgccgcgttgcgcgagcgccttctcgcgctgggcgggagc
gacgacgaggtcgacgccgcccctgcgatgacggtcgacgtcgcggacccgggccccgac
gggctcggggagtggctctccgcacgcgcggacgtgacgctcgggctcgacgtcgagggt
cgcacggcacccacgggggccgacgcgtgggcggtgacggtgaccgacggttcggaggcc
gtcgtcgtcgacctcgccgacgtctccgctgccgacgagtccgccctcgcggcgtggttg
gcggacgacgcgcgcgcgatcgtcgtccacggcgcgaagtcggccgcccacgccctcgcc
gcccgcggcatggacctgcgcggcgtcaccttcgacaccgagctggccgcctacctctgc
tacccggaccagcggggctacgacctcagcgacctcgccgtccgccacctccaccgggag
ctgcgcgtcgacgacgagcccgaggcccagggcgcgctggacctctcggtcgacggctcc
ggtgccggccggcaggccgcggcgcgggccgctgcggtcctcgagctctctgaggcgctc
gtcgaggtcctcgcagaccgcggcgccacggggctcctgcgcgacctcgagctgccgctg
acccatgtcctcggcgacatggagcgcgccgggatcgccgtggacgtcgagcacctcacc
gggctcgagcggcacttcgccggccaggtggcgcaggccgccgccgacgcgtacgaggtc
atcggccgggaggtgaacctcggctcgccgaagcagctccaggaggtgctgttcgaccag
ctcgagatgccgaagacgaagaagatcaagacgggctggacgacggacgccgcggcgctc
gcggagctgttcgtcaagaccgggcacccgttcctggagcacctgctcgcccaccgcgac
gcgacgcgtctgcggcagaccgtcgagggcctcctcaagtccgtcgcggacgacgcacgc
gtccacacgtcgttccagcagaccatcgcggcgaccggccgcctcagctcgaccgacccc
aacctccagaacatcccgatccgcacggaggcaggccggcgcatccggcgggcgttcgtg
gtcgggccgggctacgagacgctgctcacggcggactacagccagatcgagatgcggatc
atggcccacctctcgggcgacgagggcctgatcgatgcgttccgctcgggcgaggacctg
cacaactacgtgggatcgcgcgtgttcgacgtgcccgccgacgaggtcacgcccgcgatg
cgctcgaagatcaaggcgatgtcgtacggcctcgcgtacgggctgtcctcctacgggctg
tcgaagcagctcagcatcggagtgccggaggcacagtcgctgatggacgactacttctcg
cggttcggggagtccgggactacctcacgggggtcgtcgacgaagcgcggtccacggggt
acaccgcgacgatcctcgggcgtcgccggtacctcccggacctcacgagcgacaaccggc
agcggcgggacatggcggagcgcatggcgctcaacgcgccgatccaggggagcgcagcag
acatcatcaaggtcgcgatgctcggggtccgcaacgcgctcgactccggcggactcacgt
cgcgcctgctgctgcaggtgcacgacgagctgctcgtcgaggtggcaccgggggagaagg
acgaggtcgagcgcatcctccgcgccgagatgggggccgcggccgagctctcggtgccgc
tggacgtgtcggtcggtgtcggtaccagctggcacgacgccggccactgaccagggaggt
cgccgccgccggccgcagctgccggccgccggtgcggccgtgacggccggacgtcgtcac
cccggtcgacgggcgacgacgaccatggtccccgggatcagccgaccgcgcaccgggccc
cacccgccccagacctgctggttgctctcgggccactcgggctcgacgacgtccacgacc
tggagaccggccgagaccacgtccctgacgtggtcgccgaccgtccggtggtactcggcg
tacgtgacccgacccgcgccgtccgactccacgtacgggcggcggtcgaagtag

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