Paraoerskovia sediminicola: GCM125_29590
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Entry
GCM125_29590 CDS
T09128
Symbol
priA
Name
(GenBank) putative primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
psek
Paraoerskovia sediminicola
Pathway
psek03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psek00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM125_29590 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psek03400
]
GCM125_29590 (priA)
Enzymes [BR:
psek01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM125_29590 (priA)
DNA repair and recombination proteins [BR:
psek03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM125_29590 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
Motif
Other DBs
NCBI-ProteinID:
BDZ43660
LinkDB
All DBs
Position
complement(3100451..3102727)
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AA seq
758 aa
AA seq
DB search
MTDQGEQQALIDLSDVPAPVAKASSRRRAGGVPVAETDPIVRVALDLAPAHLDRTFDYLV
PAAMSDDVRPGVRVKARFGAQDLDGYVLARSSTTEHDGALQPLRRLVSAEPVLTPEVARL
CRAVADRYAGTMSDVLRLAVPRRHARAEAAHVSGGPGGGGTKGSVAEQAADPADPADPAA
PAADPAAPAGPAASAGLVADPAADPDDPAQAEARERSAALWNDYGSGAAFVQRVAAGGGP
RAVWTALAGRTNGTPGVEDWAAALAGLVRSVEQAGRGVLVVLPDARDVDHLSRALDATGW
TCCTARSAGQYVRLEADDGPSPRYRSFLAALRGDVRVVVGTRAAAFAPVQDLGLVVCWSD
DEETHADPRAPYPHVREVLRLRSELEGAAWLVGSHGRSVVAQSLLASGWAREITAARDVV
RRRAPRVRALTSVELASEGAGAAARLPTAAWRAARAALEDGPVLVQVPRRGYLPVVACAR
CRTPATCGTCHGPLGLTGAAAAPQCTWCGRLAGGWRCDECHGTGLRSVRVGSERTAEELG
RAFPGVTVRQSGATAPGGVLATVPAGRALVVATPGAEPVVPGGYAAALLLDAAVSTAHVG
LAVTQAALHRWLAAAALVRPAPDGGQVLLVGDAAPAPTNALVRWDPAGLADRELTERAEL
DLPPAVRVAAVTGDREAVRAVVARVPLATATTVLGPVDVEPEGRHPDRTLAPPVRVVVRV
PAREGDTLANQLSASLGVRSARREGGGVRVRLDPEEML
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaccagggcgagcagcaggcgctcatcgacctgtccgacgtccccgcgcccgtc
gccaaggcgtcgtcccgacgccgcgcgggcggcgtccccgtcgccgagaccgacccgatc
gtgcgggtcgcgctcgacctggcgccggcgcacctcgatcgcaccttcgactacctcgtg
cccgccgcgatgtcggacgacgtccggccgggcgtacgcgtcaaggcgcggttcggcgcc
caggacctggacgggtacgtgctcgcccgctcgtcgaccaccgagcacgacggcgcgctg
cagccgttgcggcggctcgtctcggccgagcccgtgctgacccccgaggtcgcccgcctg
tgccgtgcggtcgccgaccggtacgctgggaccatgtccgacgtgctgcggctcgcggtg
ccgcgccgtcacgcccgcgccgaggccgcgcacgtgagcggcggtccgggtggaggaggc
accaagggctccgtcgccgagcaggctgccgaccctgccgaccctgccgaccctgctgct
ccagctgcggaccctgctgctcctgctggtcctgctgcttctgctggtttagttgcggac
cctgctgctgatcctgacgatcctgctcaggcggaggcccgtgagcgcagcgcagcgctg
tggaacgactacgggagcggcgccgcgttcgtgcagcgcgtcgcggccggtggcggcccg
cgtgccgtgtggacggctctcgccggccgcacgaacggcacgcccggggtcgaggactgg
gcggcggccctcgcgggtctcgtgcggtccgtcgagcaggcgggtcgcggggtgctcgtg
gtcctgcccgacgcgcgcgacgtcgaccacctgtcgcgggcgctcgacgcgaccggctgg
acctgctgcacggcgcgctcggcggggcagtacgtcaggctggaggcggacgacggcccg
tcacctcgctaccggagcttcctggcggcgttgcgcggcgacgtccgggtcgtcgtcggg
acgcgtgcagcggccttcgcccccgtgcaggacctgggcctggtcgtgtgctggtcggac
gacgaggagacgcacgcagacccgagggccccgtacccgcacgtccgggaggtgctgcgg
ctgcggagcgagctcgagggcgcggcgtggctcgtcggcagccacggccggagcgtcgtc
gcgcagtcgttgctcgcctcggggtgggcacgggagatcacggccgcgcgcgacgtcgtc
cggcgccgggcgccccgtgtccgggcgctgacctcggtcgagctggcgtcagagggcgcc
ggggcggcggcacggctccccacggcggcctggcgggcggcccgcgcagcgctcgaggac
ggcccggtcctggtgcaggtgccgcggcggggctacctgcccgtcgtcgcctgtgcgcgc
tgccgcaccccggcgacctgcggcacgtgccacggcccgctggggctgacgggcgccgcc
gccgcaccgcagtgcacgtggtgcgggcggctcgccggcgggtggcggtgcgacgagtgt
cacggcacgggactgcggtcggtgcgcgtcggctccgagcgcaccgcggaggagctcggc
cgggcgtttcctggcgtgaccgtccggcagtcgggcgccaccgcacccggtggcgtgctc
gcgaccgtccctgcgggcagagcgctcgtcgtggcgacgccgggggcggagcccgtggtc
ccgggcgggtacgcggccgcgctcctgctggacgccgcggtcagcaccgcccacgtcgga
ctcgcggtgacgcaggcggcgctgcaccggtggctcgccgccgccgcgctcgtgcgcccc
gcccccgacggcggtcaggtgctgctcgtcggtgacgccgcccccgcgcccaccaacgcc
ctggttcgctgggaccccgccgggctcgccgaccgcgagctcacggagcgcgccgagctg
gacctgccgcccgccgtgcgcgtggccgcggtgacgggggacagggaggccgtccgtgcg
gtcgtcgcccgcgtgccgctcgcgaccgcgaccaccgtgctgggaccggtcgacgtggag
cccgaggggcgccaccccgacaggacgctcgcgccgcccgtgcgggtcgtggtccgtgtc
cccgcccgcgagggggacaccctcgcgaaccagctcagcgcgtccctcggcgtccgcagc
gcgcggcgcgagggcggcggcgtgcgcgttcgcctcgacccggaggagatgctgtga
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