Pseudodesulfovibrio cashew: GM415_00030
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Entry
GM415_00030 CDS
T06353
Name
(GenBank) AAA family ATPase
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
psel
Pseudodesulfovibrio cashew
Brite
KEGG Orthology (KO) [BR:
psel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psel03400
]
GM415_00030
DNA repair and recombination proteins [BR:
psel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GM415_00030
TLS (translesion DNA synthesis) factors
Other SOS response factors
GM415_00030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_21
AAA_22
AAA_16
AAA_29
Nodulin
Motif
Other DBs
NCBI-ProteinID:
QGY38598
UniProt:
A0A6I6JBS1
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Position
4041..5654
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AA seq
537 aa
AA seq
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MLELLRIRNLALIEDVELEFSTGLNTLTGETGAGKSFIMRAVDFLLGERMEAKLVRPGAE
KASVEALFVLPEGETVVRRELSAETGRSRVFINDTLSSQPTIRDMRHKLVVHTSQHGQQK
LLSPAFQAEILDSFLPDQGLLAKRNDRLAVLNDVLERRRQILAKFDDIEKQRDFLEYQRK
EIDAVDPQPGEENDLEERKKVLKDQERAGECLQNALNVLHGEIGLLDAMTLLTREMEIIS
RLFPGFEDDRDAIEELRMLLHDLDSRLRKGPKSLGGDEENMSIDDIEKRLFELARLKRKL
RRGLDEIVDLKAEIDENLSFMDAAALDLKALGAEEEKAATELRDVLDKLNKARKKAAKTL
AILIVDELQDLGFSEHVKVHFDFEARELHPGCLDMRGRLMWVPNPGQPAQPLEKIASGGE
LSRFLLALVTLRGSNEAEPVLPTLIFDEVDAGIGGLTLNSVGNKLRALADRQQMLLITHW
PQLAGKADRHFLIQKEVLDDETYTRCDRLEGKKIKAELSRMAGGGEQGDALAEKLCK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaactgctccgcatccgcaatctcgcgctcatcgaagacgtggaactggaattc
tccaccggcctgaacaccctcacgggtgagaccggggcgggcaagtccttcatcatgcgc
gccgtggacttcctcctgggcgaacgcatggaggccaaactggtccggccaggcgcggag
aaagcctcggttgaggccctcttcgtcctgcccgagggagagacagttgtccgacgcgag
ctctccgccgaaacaggcaggagccgggtcttcatcaacgacaccctctcatcccagccg
accataagggacatgcgtcataagctggtcgttcacaccagccagcacgggcagcagaaa
ctgctctccccggccttccaggcggaaattctggactccttcctgcccgaccaggggctc
ctggccaaacgcaacgaccggctcgcagtcctcaacgacgtgctggaacgcaggcgccag
atcctggccaagttcgacgacatcgagaagcagcgcgacttcctggagtatcagcgcaag
gagatcgatgcggtggacccgcaaccgggcgaggagaacgatctggaagagcggaagaaa
gtactcaaggaccaggagcgggccggtgaatgcctgcagaacgccctgaacgtcctgcat
ggggagatcggcctgctggacgccatgaccctgctcaccagggaaatggagatcatctcc
cgcctcttccccgggttcgaggatgaccgggacgccatcgaggagttgcgcatgctactc
cacgacctggactcccgcctgcgcaagggccccaagagcctcggcggcgacgaagagaac
atgagcatcgacgacatcgaaaagcgcctcttcgagctggcccggctcaaacgcaagctc
aggcgtggcctggacgagatcgtggacctcaaggccgagatcgacgagaacctctccttc
atggacgccgcagccctggacctcaaggcgctgggcgcggaggaggaaaaggccgcgacg
gaactccgggacgtccttgacaagctgaacaaggctcgtaaaaaggcggccaaaacgctc
gccatcctcatcgtggacgagctccaggacctcggcttttccgaacacgtcaaggtccac
ttcgatttcgaggcgcgtgagcttcatccgggctgcctggacatgcgcggcaggctcatg
tgggtgcccaaccccggccagcccgcccaacctttggaaaagatcgcctcgggcggcgaa
ctctcccgcttccttctggcactggtaaccctgcgcggcagcaacgaagccgaaccggtc
ctgccgactctcattttcgacgaggtggacgcgggcatcggcggcctgacactaaactcc
gtgggaaacaagctgcgcgccctggccgaccggcagcagatgctgctcatcacccactgg
ccccagctcgcgggcaaggccgaccggcattttctcatccagaaggaagtcctcgacgac
gagacctacacccgctgcgaccgtctcgaaggcaaaaagataaaagcggagctctcccgc
atggccggaggcggcgagcagggagatgcccttgcggagaagctatgcaagtaa
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